Al_scaffold_0003_2191 (Arabidopsis lyrata)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 Al_scaffold_0003_2191 T164260_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CSP4
M01902_2.00 		Arabidopsis thaliana
AAWAAAAM
KTTTTWTT		 PBM
Weirauch et al.(2014)
pTH7494 		0.720 0.720
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Al_scaffold_0003_2191 CSD 9 59

Links

Other CSD family TFs
Other Arabidopsis lyrata TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0003_3962 Arabidopsis lyrata Al_scaffold_0003_3962 N 0.896
fgenesh1_pg.C_scaffold_1003297 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1003297 N 0.896
fgenesh1_pg.C_scaffold_22000003 Arabidopsis lyrata fgenesh1_pg.C_scaffold_22000003 N 0.896
fgenesh1_pg.C_scaffold_5000596 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5000596 N 0.896
fgenesh1_pg.C_scaffold_6002361 Arabidopsis lyrata fgenesh1_pg.C_scaffold_6002361 N 0.896
scaffold_304236.1 Arabidopsis lyrata scaffold_304236.1 N 0.896
fgenesh1_pg.C_scaffold_408000001 Arabidopsis lyrata fgenesh1_pg.C_scaffold_408000001 N 0.875
Al_scaffold_0007_2456 Arabidopsis lyrata Al_scaffold_0007_2456 N 0.875
Al_scaffold_0001_2509 Arabidopsis lyrata Al_scaffold_0001_2509 N 0.875
Al_scaffold_0002_1084 Arabidopsis lyrata Al_scaffold_0002_1084 N 0.875
Al_scaffold_0002_1656 Arabidopsis lyrata Al_scaffold_0002_1656 N 0.875
Al_scaffold_0001_1216 Arabidopsis lyrata Al_scaffold_0001_1216 N 0.875