YBX1 (Dasypus novemcinctus)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSDNOG00000036760 T164517_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YBX1
M04661_2.00 		Homo sapiens
GRTGGWACR
YGTWCCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX 		0.821 0.821
YBX1
M10411_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q3 		0.821 0.821
YBX1
M10412_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q4 		0.821 0.821
YBX1
M04662_2.00 		Homo sapiens
GRTGKDRCD
HGYHMCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX 		0.821 0.821
NEMVEDRAFT_v1g104083
M01207_2.00 		Nematostella vectensis
NNNDDHRN
NYDHHNNN		 PBM
Lambert et al.(2019)
pTH9768 		0.718 0.718
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDNOP00000017828 CSD 55 93

Links

Other CSD family TFs
Other Dasypus novemcinctus TFs

118 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
YBX1 Homo sapiens ENSG00000065978 D 1.000
ybx3.S Xenopus laevis XB-GENE-1007563 I 0.974
ENSPSIG00000009247 Pelodiscus sinensis ENSPSIG00000009247 I 0.821
ENSPANG00000016576 Papio anubis ENSPANG00000016576 I 0.821
ENSPPYG00000004279 Pongo abelii ENSPPYG00000004279 I 0.821
ENSPSIG00000011017 Pelodiscus sinensis ENSPSIG00000011017 I 0.821
ENSPFOG00000011441 Poecilia formosa ENSPFOG00000011441 I 0.821
YBX1 Pteropus vampyrus ENSPVAG00000005504 I 0.821
YBX2 Sorex araneus ENSSARG00000000488 I 0.821
Ybx1 Rattus norvegicus ENSRNOG00000023786 I 0.821
Ybx3 Rattus norvegicus ENSRNOG00000005480 I 0.821
YBX3 Pteropus vampyrus ENSPVAG00000006740 I 0.821
ENSPANG00000013156 Papio anubis ENSPANG00000013156 I 0.821
ENSPANG00000010280 Papio anubis ENSPANG00000010280 I 0.821
ENSNLEG00000012324 Nomascus leucogenys ENSNLEG00000012324 I 0.821
Ybx3 Mus musculus ENSMUSG00000030189 I 0.821
Ybx1 Mus musculus ENSMUSG00000028639 I 0.821
YBX3 Monodelphis domestica ENSMODG00000018248 I 0.821
ENSOANG00000001663 Ornithorhynchus anatinus ENSOANG00000001663 I 0.821
ENSOARG00000020447 Ovis aries ENSOARG00000020447 I 0.821
ybx1 Oryzias latipes ENSORLG00000004225 I 0.821
ENSONIG00000002062 Oreochromis niloticus ENSONIG00000002062 I 0.821
YBX1 Otolemur garnettii ENSOGAG00000006784 I 0.821
ENSOARG00000020919 Ovis aries ENSOARG00000020919 I 0.821
ENSSHAG00000003262 Sarcophilus harrisii ENSSHAG00000003262 I 0.821
YBX3 Sus scrofa ENSSSCG00000000633 I 0.821
ENSP00000228251 Macaca fascicularis ENSP00000228251 I 0.821
Gfo_R007354 Geospiza fortis Gfo_R007354 I 0.821
ENSBTAP00000012735-D1 Bos grunniens ENSBTAP00000012735-D1 I 0.821
Brh_R007443 Buceros rhinoceros Brh_R007443 I 0.821
Afo_R014263 Aptenodytes forsteri Afo_R014263 I 0.821
Pvit_10025 Pogona vitticeps Pvit_10025 I 0.821
AAH42217 Xenopus laevis AAH42217 I 0.821
ybx1.S Xenopus laevis XB-GENE-865405 I 0.821
ybx1 Xenopus tropicalis XB-GENE-480746 I 0.821
CAA42778 Xenopus laevis CAA42778 I 0.821
AAI30161 Xenopus laevis AAI30161 I 0.821
Aan_R014295 Calypte anna Aan_R014295 I 0.821
Aan_R001440 Calypte anna Aan_R001440 I 0.821
YBX1 Taeniopygia guttata ENSTGUG00000017262 I 0.821
YBX3 Taeniopygia guttata ENSTGUG00000012047 I 0.821
YBX3 Tupaia belangeri ENSTBEG00000012570 I 0.821
YBX1 Monodelphis domestica ENSMODG00000017214 I 0.821
ybx1 Tetraodon nigroviridis ENSTNIG00000011989 I 0.821
ybx1 Takifugu rubripes ENSTRUG00000015333 I 0.821
ENSXMAG00000018674 Xiphophorus maculatus ENSXMAG00000018674 I 0.821
YBX3 Vicugna pacos ENSVPAG00000000876 I 0.821
YBX1 Vicugna pacos ENSVPAG00000000068 I 0.821
YBX2 Tursiops truncatus ENSTTRG00000009780 I 0.821
ENSSHAG00000014452 Sarcophilus harrisii ENSSHAG00000014452 I 0.821
YBX1 Ornithorhynchus anatinus ENSOANG00000011725 I 0.821
Ybx3 Dipodomys ordii ENSDORG00000009103 I 0.821
Ybx2 Dipodomys ordii ENSDORG00000010882 I 0.821
ybx1 Danio rerio ENSDARG00000004757 I 0.821
ENSCSAG00000008744 Chlorocebus sabaeus ENSCSAG00000008744 I 0.821
YBX3 Cavia porcellus ENSCPOG00000011329 I 0.821
YBX3 Macaca mulatta ENSMMUG00000022469 I 0.821
YBX3 Equus caballus ENSECAG00000013777 I 0.821
YBX3 Echinops telfairi ENSETEG00000002557 I 0.821
YBX2 Echinops telfairi ENSETEG00000014271 I 0.821
YBX3 Erinaceus europaeus ENSEEUG00000010415 I 0.821
YBX1 Erinaceus europaeus ENSEEUG00000005657 I 0.821
ENSECAG00000023592 Equus caballus ENSECAG00000023592 I 0.821
YBX1 Cavia porcellus ENSCPOG00000010888 I 0.821
ENSCJAG00000031567 Callithrix jacchus ENSCJAG00000031567 I 0.821
ENSAPLG00000003147 Anas platyrhynchos ENSAPLG00000003147 I 0.821
YBX3 Bos taurus ENSBTAG00000009663 I 0.821
ENSAMXG00000014478 Astyanax mexicanus ENSAMXG00000014478 I 0.821
ENSAMEG00000009393 Ailuropoda melanoleuca ENSAMEG00000009393 I 0.821
ENSAMEG00000000494 Ailuropoda melanoleuca ENSAMEG00000000494 I 0.821
YBX1 Bos taurus ENSBTAG00000017368 I 0.821
YBX1 Canis familiaris ENSCAFG00000002541 I 0.821
ENSCJAG00000021660 Callithrix jacchus ENSCJAG00000021660 I 0.821
ENSCJAG00000003155 Callithrix jacchus ENSCJAG00000003155 I 0.821
YBX3 Choloepus hoffmanni ENSCHOG00000011988 I 0.821
YBX3 Canis familiaris ENSCAFG00000013401 I 0.821
ENSFALG00000003661 Ficedula albicollis ENSFALG00000003661 I 0.821
ENSECAG00000008961 Equus caballus ENSECAG00000008961 I 0.821
YBX3 Meleagris gallopavo ENSMGAG00000014224 I 0.821
ENSMMUG00000013136 Macaca mulatta ENSMMUG00000013136 I 0.821
ENSLOCG00000002530 Lepisosteus oculatus ENSLOCG00000002530 I 0.821
ENSMICG00000014984 Microcebus murinus ENSMICG00000014984 I 0.821
YBX1 Meleagris gallopavo ENSMGAG00000006879 I 0.821
YBX3 Loxodonta africana ENSLAFG00000017247 I 0.821
YBX3 Felis catus ENSFCAG00000027748 I 0.821
ENSMICG00000004602 Microcebus murinus ENSMICG00000004602 I 0.821
ENSLACG00000018135 Latimeria chalumnae ENSLACG00000018135 I 0.821
ENSLAFG00000007597 Loxodonta africana ENSLAFG00000007597 I 0.821
YBX1 Gallus gallus ENSGALG00000004848 I 0.821
ybx1 Gasterosteus aculeatus ENSGACG00000006447 I 0.821
YBX3 Homo sapiens ENSG00000060138 I 0.821
YBX3 Gorilla gorilla ENSGGOG00000001352 I 0.821
ENSGALG00000018512 Gallus gallus ENSGALG00000018512 I 0.821
ENSLOCG00000013819 Lepisosteus oculatus ENSLOCG00000013819 I 0.795
ENSPANG00000019627 Papio anubis ENSPANG00000019627 I 0.795
ENSGMOG00000015216 Gadus morhua ENSGMOG00000015216 I 0.795
ENSONIG00000018954 Oreochromis niloticus ENSONIG00000018954 I 0.795
ENSOANG00000013173 Ornithorhynchus anatinus ENSOANG00000013173 I 0.792
fgenesh2_pg.scaffold_14000192 Branchiostoma floridae fgenesh2_pg.scaffold_14000192 I 0.784
ENSAPLG00000004899 Anas platyrhynchos ENSAPLG00000004899 I 0.769
e_gw.440.24.1 Branchiostoma floridae e_gw.440.24.1 I 0.769
ENSMODG00000022963 Monodelphis domestica ENSMODG00000022963 I 0.769
ENSOGAG00000032929 Otolemur garnettii ENSOGAG00000032929 I 0.769
ENSPANG00000005177 Papio anubis ENSPANG00000005177 I 0.769
ybx2.S Xenopus laevis XB-GENE-6254213 I 0.769
KGM_01291 Danaus plexippus KGM_01291 I 0.769
ENSCJAG00000010572 Callithrix jacchus ENSCJAG00000010572 I 0.769
CLEC013417 Cimex lectularius CLEC013417 I 0.750
LDEC002142 Leptinotarsa decemlineata LDEC002142 I 0.744
SPU_003107 Strongylocentrotus purpuratus SPU_003107 I 0.744
ISCW022953 Ixodes scapularis ISCW022953 N 0.744
Sakowv30002198m.g Saccoglossus kowalevskii Sakowv30002198m.g I 0.744
ENSCJAG00000035120 Callithrix jacchus ENSCJAG00000035120 I 0.744
ENSCJAG00000035469 Callithrix jacchus ENSCJAG00000035469 I 0.744
ENSCJAG00000033824 Callithrix jacchus ENSCJAG00000033824 I 0.718
PHUM156710 Pediculus humanus PHUM156710 I 0.718
CapteG166603 Capitella teleta CapteG166603 I 0.718
ENSOGAG00000014939 Otolemur garnettii ENSOGAG00000014939 I 0.718