OB02G23180 (Oryza brachyantha)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 OB02G23180 T165030_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CSP4
M01902_2.00 		Arabidopsis thaliana
AAWAAAAM
KTTTTWTT		 PBM
Weirauch et al.(2014)
pTH7494 		0.718 0.718
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB02G23180.1 CSD 5 43

Links

Other CSD family TFs
Other Oryza brachyantha TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OB08G12040 Oryza brachyantha OB08G12040 N 0.795
BRADI1G02640 Brachypodium distachyon BRADI1G02640 N 0.769
BRADI2G07090 Brachypodium distachyon BRADI2G07090 N 0.744
TRIUR3_31144 Triticum urartu TRIUR3_31144 N 0.744
Pavir.Gb00310 Panicum virgatum Pavir.Gb00310 N 0.718
Pavir.J33349 Panicum virgatum Pavir.J33349 N 0.718
e_gw1.1.536.1 Chlorella vulgaris e_gw1.1.536.1 N 0.718
MDP0000225222 Malus domestica MDP0000225222 N 0.718
Pavir.J33226 Panicum virgatum Pavir.J33226 N 0.718
VIT_03s0038g02130 Vitis vinifera VIT_03s0038g02130 I 0.718
GRMZM2G389768 Zea mays GRMZM2G389768 N 0.718
ONIVA01G18720 Oryza nivara ONIVA01G18720 N 0.718
Sb04g001720 Sorghum bicolor Sb04g001720 N 0.718
fgenesh1_pg.1_#_433 Coccomyxa subellipsoidea C169 fgenesh1_pg.1_#_433 N 0.718
gene07618-v1.0-hybrid Fragaria vesca gene07618-v1.0-hybrid N 0.718