CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PITG_10442
(
Phytophthora infestans
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00313 (CSD)
IPR002059
PITG_10442
T165099_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PITG_10442T0
CSD
180
241
EQGFIVSIKENFGFVSCMERDGDLFFHISEAPVDVQLQDEVEFRVKYNQRSDKEMACQLVAL
PITG_10442T0
CSD
403
485
ETGVVDRVKNGGGFIKCCDRPVDVYFPFHEIRESEEAEKSDKKLETDTEDKSRPGRQAKGPSMREGDEVSFFVYEDNEDDSGR
PITG_10442T0
CSD
627
688
ETGVINALKEDFGFIKCAERSGDAYFRFSDVMGTSRSFNNGTEVAFDVLVDNKSDHIRATRL
PITG_10442T0
CSD
914
984
GFIVSVRPEGFGFIQPAQTVPGTLEENLFFHIKEITTGQTLAELKEGTEVQYTVFVDEKKKKNRATAISVV
Links
Other
CSD
family TFs
Other
Phytophthora infestans
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_04436
Phytophthora parasitica
F443_04436
N
0.812
Physo138371
Phytophthora sojae
Physo138371
N
0.790
Phyra82063
Phytophthora ramorum
Phyra82063
N
0.777
fgenesh_scip_prom.28083.450
Phytophthora lateralis
fgenesh_scip_prom.28083.450
N
0.773