CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Satb2
(
Rattus norvegicus
)
CUT,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
ENSRNOG00000010188
T167254_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Enables histone deacetylase binding activity. Predicted to be involved in chromatin remodeling and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within several processes, including generation of neurons; regulation of transcription by RNA polymerase II; and skeletal system development. Predicted to be located in nucleoplasm. Predicted to be part of histone deacetylase complex and transcription regulator complex. Human ortholog(s) of this gene implicated in SATB2-associated syndrome. Orthologous to human SATB2 (SATB homeobox 2). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SATB1
M10420_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SATB1_Q3
0.835
0.835
SATB1
M10421_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SATB1_Q5_01
0.835
0.835
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000044829
CUT
355
434
NSSVEVSPDIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLLVNLRAMQNFLNLPEVERDRIYQ
ENSRNOP00000044829
CUT
479
557
ANVNITAAIYDEIQQEMKRAKVSQALFAKVAANKSQGWLCELLRWKENPSPENRTLWENLCTIRRFLNLPQHERDVIYE
ENSRNOP00000044829
Homeodomain
615
672
PRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYHVKH
ENSRNOP00000071049
CUT
355
434
NSSVEVSPDIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLLVNLRAMQNFLNLPEVERDRIYQ
ENSRNOP00000071049
CUT
479
557
ANVNITAAIYDEIQQEMKRAKVSQALFAKVAANKSQGWLCELLRWKENPSPENRTLWENLCTIRRFLNLPQHERDVIYE
ENSRNOP00000071049
Homeodomain
615
672
PRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYHVKH
Links
Other
CUT,Homeodomain
family TFs
Other
Rattus norvegicus
TFs
122 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Satb2
Mus musculus
ENSMUSG00000038331
I
1.000
ENSOARG00000015783
Ovis aries
ENSOARG00000015783
I
1.000
SATB2
Oryctolagus cuniculus
ENSOCUG00000009700
I
1.000
ENSMPUG00000007972
Mustela putorius furo
ENSMPUG00000007972
I
1.000
SATB2
Monodelphis domestica
ENSMODG00000012352
I
1.000
SATB2
Equus caballus
ENSECAG00000010043
I
1.000
SATB2
Felis catus
ENSFCAG00000015781
I
1.000
SATB2
Loxodonta africana
ENSLAFG00000002924
I
1.000
SATB2
Otolemur garnettii
ENSOGAG00000006949
I
1.000
SATB2
Ochotona princeps
ENSOPRG00000003979
I
1.000
ENSP00000401112-D1
Bos grunniens
ENSP00000401112-D1
I
1.000
ENSP00000405420
Macaca fascicularis
ENSP00000405420
I
1.000
Myotis_brandtii_Satb2_10019975
Myotis brandtii
Myotis_brandtii_Satb2_10019975
I
1.000
ENSSHAG00000011077
Sarcophilus harrisii
ENSSHAG00000011077
I
1.000
ENSPANG00000011212
Papio anubis
ENSPANG00000011212
I
1.000
SATB2
Pteropus vampyrus
ENSPVAG00000012029
I
1.000
SATB2
Dasypus novemcinctus
ENSDNOG00000001292
I
1.000
ENSNLEG00000006893
Nomascus leucogenys
ENSNLEG00000006893
I
1.000
SATB2
Callithrix jacchus
ENSCJAG00000004111
I
1.000
SATB2
Canis familiaris
ENSCAFG00000010971
I
1.000
SATB2
Bos taurus
ENSBTAG00000016334
I
1.000
ENSCSAG00000011380
Chlorocebus sabaeus
ENSCSAG00000011380
I
1.000
ENSAMEG00000005350
Ailuropoda melanoleuca
ENSAMEG00000005350
I
1.000
SATB2
Choloepus hoffmanni
ENSCHOG00000012005
I
0.995
ENSPPYG00000013052
Pongo abelii
ENSPPYG00000013052
I
0.995
SATB2
Gorilla gorilla
ENSGGOG00000014123
I
0.995
SATB2
Pan troglodytes
ENSPTRG00000012779
I
0.995
SATB2
Homo sapiens
ENSG00000119042
I
0.995
SATB2
Cavia porcellus
ENSCPOG00000015198
I
0.995
SATB2
Myotis lucifugus
ENSMLUG00000001554
I
0.995
ENSPSIG00000018044
Pelodiscus sinensis
ENSPSIG00000018044
I
0.990
ENSAPLG00000008131
Anas platyrhynchos
ENSAPLG00000008131
I
0.990
SATB2
Meleagris gallopavo
ENSMGAG00000007173
I
0.990
Aan_R006754
Calypte anna
Aan_R006754
I
0.990
SATB2
Procavia capensis
ENSPCAG00000012822
I
0.990
Gfo_R001489
Geospiza fortis
Gfo_R001489
I
0.990
ENSFALG00000004242
Ficedula albicollis
ENSFALG00000004242
I
0.990
Afo_R004114
Aptenodytes forsteri
Afo_R004114
I
0.990
SATB2
Gallus gallus
ENSGALG00000008135
I
0.990
Tal_R006309
Tyto alba
Tal_R006309
I
0.990
Pvit_10645
Pogona vitticeps
Pvit_10645
I
0.985
ENSLACG00000017798
Latimeria chalumnae
ENSLACG00000017798
I
0.985
SATB2
Taeniopygia guttata
ENSTGUG00000010480
I
0.985
SATB2
Microcebus murinus
ENSMICG00000009378
I
0.980
Ogr08679
Ophisaurus gracilis
Ogr08679
I
0.980
SATB2
Anolis carolinensis
ENSACAG00000009821
I
0.975
satb2
Xenopus tropicalis
XB-GENE-5822252
I
0.960
SATB2
Sorex araneus
ENSSARG00000014343
I
0.950
ENSLOCG00000004032
Lepisosteus oculatus
ENSLOCG00000004032
I
0.920
ENSONIG00000013780
Oreochromis niloticus
ENSONIG00000013780
I
0.915
SATB2
Gasterosteus aculeatus
ENSGACG00000009037
I
0.910
ENSAMXG00000002186
Astyanax mexicanus
ENSAMXG00000002186
I
0.905
ENSPFOG00000000642
Poecilia formosa
ENSPFOG00000000642
I
0.905
satb2
Danio rerio
ENSDARG00000061885
I
0.905
SATB2
Takifugu rubripes
ENSTRUG00000015384
I
0.900
ENSGMOG00000006865
Gadus morhua
ENSGMOG00000006865
I
0.900
ENSXMAG00000007412
Xiphophorus maculatus
ENSXMAG00000007412
I
0.900
SATB2
Tetraodon nigroviridis
ENSTNIG00000005271
I
0.891
ENSONIG00000015271
Oreochromis niloticus
ENSONIG00000015271
I
0.886
ENSPFOG00000005488
Poecilia formosa
ENSPFOG00000005488
I
0.876
ENSXMAG00000004215
Xiphophorus maculatus
ENSXMAG00000004215
I
0.876
satb1
Xenopus tropicalis
XB-GENE-854103
I
0.850
ENSPMAG00000005314
Petromyzon marinus
ENSPMAG00000005314
I
0.849
ENSONIG00000008688
Oreochromis niloticus
ENSONIG00000008688
I
0.848
satb2
Takifugu rubripes
ENSTRUG00000005073
I
0.845
ENSAPLG00000009362
Anas platyrhynchos
ENSAPLG00000009362
I
0.841
SATB1
Taeniopygia guttata
ENSTGUG00000003198
I
0.840
ENSFALG00000009258
Ficedula albicollis
ENSFALG00000009258
I
0.840
Pvit_16605
Pogona vitticeps
Pvit_16605
I
0.840
SATB1
Anolis carolinensis
ENSACAG00000007941
I
0.840
SATB1
Meleagris gallopavo
ENSMGAG00000010929
I
0.840
Afo_R015456
Aptenodytes forsteri
Afo_R015456
I
0.840
SATB1
Gallus gallus
ENSGALG00000011254
I
0.840
satb2
Gasterosteus aculeatus
ENSGACG00000014437
I
0.838
ENSSHAG00000015368
Sarcophilus harrisii
ENSSHAG00000015368
I
0.835
Myotis_brandtii_Satb1_10034564
Myotis brandtii
Myotis_brandtii_Satb1_10034564
I
0.835
ENSLACG00000005399
Latimeria chalumnae
ENSLACG00000005399
I
0.835
SATB1
Erinaceus europaeus
ENSEEUG00000010435
I
0.835
satb2
Tetraodon nigroviridis
ENSTNIG00000014467
I
0.835
SATB1
Sus scrofa
ENSSSCG00000011201
I
0.835
SATB1
Cavia porcellus
ENSCPOG00000007101
I
0.835
SATB1
Monodelphis domestica
ENSMODG00000014765
I
0.835
SATB1
Myotis lucifugus
ENSMLUG00000001860
I
0.835
satb1b
Danio rerio
ENSDARG00000062621
I
0.832
Ogr08410
Ophisaurus gracilis
Ogr08410
I
0.831
SATB1
Otolemur garnettii
ENSOGAG00000015441
I
0.831
SATB1
Microcebus murinus
ENSMICG00000017153
I
0.831
SATB1
Gorilla gorilla
ENSGGOG00000001779
I
0.831
Satb1
Mus musculus
ENSMUSG00000023927
I
0.831
SATB1
Homo sapiens
ENSG00000182568
D
0.831
SATB1
Oryctolagus cuniculus
ENSOCUG00000007174
I
0.831
ENSNLEG00000000912
Nomascus leucogenys
ENSNLEG00000000912
I
0.831
SATB1
Felis catus
ENSFCAG00000004295
I
0.831
ENSMPUG00000001406
Mustela putorius furo
ENSMPUG00000001406
I
0.831
SATB1
Callithrix jacchus
ENSCJAG00000003645
I
0.831
SATB1
Tursiops truncatus
ENSTTRG00000006209
I
0.831
Satb1
Rattus norvegicus
ENSRNOG00000012942
I
0.831
SATB1
Loxodonta africana
ENSLAFG00000009015
I
0.831
SATB1
Procavia capensis
ENSPCAG00000008567
I
0.831
ENSPPYG00000014077
Pongo abelii
ENSPPYG00000014077
I
0.831
SATB1
Pan troglodytes
ENSPTRG00000014677
I
0.831
ENSMMUG00000019009
Macaca mulatta
ENSMMUG00000019009
I
0.831
Satb1
Dipodomys ordii
ENSDORG00000005578
I
0.830
ENSLOCG00000006524
Lepisosteus oculatus
ENSLOCG00000006524
I
0.830
ENSP00000333367
Macaca fascicularis
ENSP00000333367
I
0.830
SATB1
Equus caballus
ENSECAG00000023585
I
0.825
SATB1
Bos taurus
ENSBTAG00000021158
I
0.825
ENSOARG00000015604
Ovis aries
ENSOARG00000015604
I
0.825
SATB2
Tupaia belangeri
ENSTBEG00000002443
I
0.825
ENSXMAG00000018662
Xiphophorus maculatus
ENSXMAG00000018662
I
0.815
ENSPFOG00000003900
Poecilia formosa
ENSPFOG00000003900
I
0.815
satb1b
Tetraodon nigroviridis
ENSTNIG00000011663
I
0.810
satb1b
Gasterosteus aculeatus
ENSGACG00000013013
I
0.810
ENSAMXG00000015155
Astyanax mexicanus
ENSAMXG00000015155
I
0.805
ENSGMOG00000013657
Gadus morhua
ENSGMOG00000013657
I
0.800
Brh_R001953
Buceros rhinoceros
Brh_R001953
I
0.765
ENSTSYG00000005284
Tarsius syrichta
ENSTSYG00000005284
I
0.765
AEJ84495
Xenopus laevis
AEJ84495
N
0.735
SATB1
Dasypus novemcinctus
ENSDNOG00000025323
I
0.715
ENSOANG00000004992
Ornithorhynchus anatinus
ENSOANG00000004992
I
0.710
SATB2
Sus scrofa
ENSSSCG00000021657
N
0.705