Satb2 (Rattus norvegicus)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02376 (CUT)
PF00046 (Homeobox) 		IPR003350
IPR001356 		ENSRNOG00000010188 T167254_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables histone deacetylase binding activity. Predicted to be involved in chromatin remodeling and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within several processes, including generation of neurons; regulation of transcription by RNA polymerase II; and skeletal system development. Predicted to be located in nucleoplasm. Predicted to be part of histone deacetylase complex and transcription regulator complex. Human ortholog(s) of this gene implicated in SATB2-associated syndrome. Orthologous to human SATB2 (SATB homeobox 2). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SATB1
M10420_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SATB1_Q3 		0.835 0.835
SATB1
M10421_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SATB1_Q5_01 		0.835 0.835
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000044829 CUT 355 434
ENSRNOP00000044829 CUT 479 557
ENSRNOP00000044829 Homeodomain 615 672
ENSRNOP00000071049 CUT 355 434
ENSRNOP00000071049 CUT 479 557
ENSRNOP00000071049 Homeodomain 615 672

Links

Other CUT,Homeodomain family TFs
Other Rattus norvegicus TFs

Invalid Input OrderBy

122 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action