CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nOo.2.0.1.g00487
(
Onchocerca ochengi
)
CUT,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
nOo.2.0.1.g00487
T167596_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nOo.2.0.1.t00487-RA
CUT
558
639
GSKALNTTEIAKQCKHLMVTHNIGQRLFAKYIMNQVVKSQGSLSELLSKPRHWNKLTDKGREAFRRMYGWVSDPKAIELLCN
nOo.2.0.1.t00487-RA
CUT
828
902
RYPVLDTEDIVRQIKDFLCLNSISQRQFGEHVLGLSQGSVSDLLARPKPWAMLTQKGREPFVRMQLFLNEAQSLV
nOo.2.0.1.t00487-RA
CUT
988
1063
LMADTSEIARQVKDRLHSNGISQKTFGDVVLGVSPGGVSELLAKPKTWEQLSPRARDLYRKMSEWLGELDGNKRIQ
nOo.2.0.1.t00487-RA
Homeodomain
1117
1173
KAQRTVITDQQKEALKHVFERDQHPNQRTIEQLSQTLSLSTRTVSNWFHNYRTRQKA
Links
Other
CUT,Homeodomain
family TFs
Other
Onchocerca ochengi
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WBGene00245175
Onchocerca volvulus
WBGene00245175
N
0.996
OFLC_0001472101
Onchocerca flexuosa
OFLC_0001472101
N
0.993
nDi.2.2.2.g00652
Dirofilaria immitis
nDi.2.2.2.g00652
N
0.979
nLs.2.1.2.g02014
Litomosoides sigmodontis
nLs.2.1.2.g02014
N
0.972
nAv.1.0.1.g08192
Acanthocheilonema viteae
nAv.1.0.1.g08192
N
0.954
LOAG_00892
Loa loa
LOAG_00892
N
0.947
Bm6810
Brugia malayi
Bm6810
N
0.930
WUBG_03061
Wuchereria bancrofti
WUBG_03061
N
0.873