Dnmt1 (Rattus norvegicus)
CxxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02008 (zf-CXXC) IPR002857 ENSRNOG00000039859 T168295_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables several functions, including DNA (cytosine-5-)-methyltransferase activity; estrogen receptor binding activity; and histone deacetylase binding activity. Involved in several processes, including DNA metabolic process; cellular response to growth factor stimulus; and nervous system development. Located in cytoplasm; neuronal cell body; and nucleus. Part of protein-containing complex. Used to study choline deficiency disease and lung carcinoma. Biomarker of choline deficiency disease; congenital heart disease; congestive heart failure; liver disease (multiple); and type 2 diabetes mellitus. Human ortholog(s) of this gene implicated in Graves' disease; autosomal dominant cerebellar ataxia, deafness and narcolepsy; hereditary sensory neuropathy; hereditary sensory neuropathy type 1E; and lung non-small cell carcinoma. Orthologous to human DNMT1 (DNA methyltransferase 1). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DNMT1
M01913_2.00
Homo sapiens
NNNNNCGGNN

NNCCGNNNNN
PBM
Weirauch et al.(2014)
pTH7029
0.894 0.894
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000063029 CxxC 649 695
ENSRNOP00000063831 CxxC 649 695

Links

Other CxxC family TFs
Other Rattus norvegicus TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Dnmt1 Mus musculus ENSMUSG00000004099 I 0.979
ENSSTOG00000010841 Ictidomys tridecemlineatus ENSSTOG00000010841 I 0.936
DNMT1 Loxodonta africana ENSLAFG00000002818 I 0.915
ENSMEUG00000012650 Macropus eugenii ENSMEUG00000012650 I 0.915
DNMT1 Monodelphis domestica ENSMODG00000005463 I 0.915
DNMT1 Dasypus novemcinctus ENSDNOG00000003313 I 0.915
ENSOCUG00000008415 Oryctolagus cuniculus ENSOCUG00000008415 I 0.894
ENSPANG00000001264 Papio anubis ENSPANG00000001264 I 0.894
ENSNLEG00000012092 Nomascus leucogenys ENSNLEG00000012092 I 0.894
DNMT1 Myotis lucifugus ENSMLUG00000001347 I 0.894
DNMT1 Microcebus murinus ENSMICG00000010231 I 0.894
DNMT1 Macaca mulatta ENSMMUG00000014604 I 0.894
ENSPPYG00000009545 Pongo abelii ENSPPYG00000009545 I 0.894
ENSOANG00000012255 Ornithorhynchus anatinus ENSOANG00000012255 I 0.894
ENSOARG00000015380 Ovis aries ENSOARG00000015380 I 0.894
DNMT1 Pteropus vampyrus ENSPVAG00000003676 I 0.894
ENSP00000352516-D1 Bos grunniens ENSP00000352516-D1 I 0.894
Cmyd_10002310 Chelonia mydas Cmyd_10002310 I 0.894
ENSP00000352516 Macaca fascicularis ENSP00000352516 I 0.894
Gfo_R002685 Geospiza fortis Gfo_R002685 I 0.894
Myotis_brandtii_DNMT1_10007965 Myotis brandtii Myotis_brandtii_DNMT1_10007965 I 0.894
Alligator_sinensis_CCG017947.1 Alligator sinensis Alligator_sinensis_CCG017947.1 I 0.894
Afo_R010037 Aptenodytes forsteri Afo_R010037 I 0.894
ENSSHAG00000008894 Sarcophilus harrisii ENSSHAG00000008894 I 0.894
DNMT1 Sus scrofa ENSSSCG00000013659 I 0.894
DNMT1 Tursiops truncatus ENSTTRG00000003178 I 0.894
DNMT1 Vicugna pacos ENSVPAG00000006117 I 0.894
DNMT1 Pan troglodytes ENSPTRG00000010461 I 0.894
DNMT1 Procavia capensis ENSPCAG00000011023 I 0.894
DNMT1 Equus caballus ENSECAG00000026909 I 0.894
DNMT1 Felis catus ENSFCAG00000012246 I 0.894
ENSCSAG00000007378 Chlorocebus sabaeus ENSCSAG00000007378 I 0.894
DNMT1 Cavia porcellus ENSCPOG00000019557 I 0.894
DNMT1 Callithrix jacchus ENSCJAG00000005794 I 0.894
DNMT1 Homo sapiens ENSG00000130816 D 0.894
DNMT1 Bos taurus ENSBTAG00000002736 I 0.894
DNMT1 Gorilla gorilla ENSGGOG00000016574 I 0.894
ENSGALG00000028997 Gallus gallus ENSGALG00000028997 I 0.894
DNMT1 Canis familiaris ENSCAFG00000017892 I 0.872
ENSPSIG00000002916 Pelodiscus sinensis ENSPSIG00000002916 I 0.872
DNMT1 Ochotona princeps ENSOPRG00000007032 I 0.872
Aan_R006371 Calypte anna Aan_R006371 I 0.872
ENSFALG00000007760 Ficedula albicollis ENSFALG00000007760 I 0.872
ENSAMEG00000011823 Ailuropoda melanoleuca ENSAMEG00000011823 I 0.872
DNMT1 Otolemur garnettii ENSOGAG00000001265 I 0.872
ENSMPUG00000006829 Mustela putorius furo ENSMPUG00000006829 I 0.872
DNMT1 Choloepus hoffmanni ENSCHOG00000009490 I 0.860
Ogr12994 Ophisaurus gracilis Ogr12994 I 0.851
DNMT1 Echinops telfairi ENSETEG00000012574 I 0.851
Dnmt1 Dipodomys ordii ENSDORG00000014116 I 0.830
ENSLOCG00000007421 Lepisosteus oculatus ENSLOCG00000007421 I 0.809
Pvit_03471 Pogona vitticeps Pvit_03471 I 0.809
dnmt1 Xenopus tropicalis XB-GENE-965562 I 0.787
DNMT1 Anolis carolinensis ENSACAG00000003948 I 0.787
GB47348 Apis mellifera GB47348 I 0.766
ENSONIG00000001574 Oreochromis niloticus ENSONIG00000001574 I 0.766
dnmt1 Danio rerio ENSDARG00000030756 I 0.766
dnmt1.S Xenopus laevis XB-GENE-17332488 I 0.766
dnmt1 Oryzias latipes ENSORLG00000005582 I 0.766
Aqu1.203581 Amphimedon queenslandica Aqu1.203581 I 0.766
dnmt1.L Xenopus laevis XB-GENE-965566 I 0.766
BGLB005557 Biomphalaria glabrata BGLB005557 I 0.750
Aqu1.204705 Amphimedon queenslandica Aqu1.204705 I 0.745
NV11649 Nasonia vitripennis NV11649 I 0.745
ENSAMXG00000012182 Astyanax mexicanus ENSAMXG00000012182 I 0.745
ENSXMAG00000018063 Xiphophorus maculatus ENSXMAG00000018063 I 0.745
ENSPFOG00000005624 Poecilia formosa ENSPFOG00000005624 I 0.745
Aqu1.224590 Amphimedon queenslandica Aqu1.224590 I 0.745
Sakowv30005306m.g Saccoglossus kowalevskii Sakowv30005306m.g I 0.745
Ocbimv22034501m.g Octopus bimaculoides Ocbimv22034501m.g I 0.739
fbxl19 Xenopus tropicalis XB-GENE-994853 I 0.737
fbxl19.S Xenopus laevis XB-GENE-994856 I 0.737
ENSTGUG00000013708 Taeniopygia guttata ENSTGUG00000013708 I 0.729
e_gw.24.105.1 Branchiostoma floridae e_gw.24.105.1 I 0.723
GB48403 Apis mellifera GB48403 I 0.723
dnmt1 Takifugu rubripes ENSTRUG00000008132 I 0.723
dnmt1 Tetraodon nigroviridis ENSTNIG00000018567 I 0.723
ENSGMOG00000003491 Gadus morhua ENSGMOG00000003491 I 0.723
ENSPMAG00000002148 Petromyzon marinus ENSPMAG00000002148 I 0.723
dnmt1 Gasterosteus aculeatus ENSGACG00000013741 I 0.723
HelroG116156 Helobdella robusta HelroG116156 I 0.723
CGI_10021920 Crassostrea gigas CGI_10021920 I 0.723
NEMVEDRAFT_v1g125496 Nematostella vectensis NEMVEDRAFT_v1g125496 I 0.723
DNMT1 Erinaceus europaeus ENSEEUG00000011466 N 0.717
Cflo_12808--XP_001122269.1_APIME Camponotus floridanus Cflo_12808--XP_001122269.1_APIME I 0.717
CapteG160905 Capitella teleta CapteG160905 I 0.717
XP_002155714.1 Hydra magnipapillata XP_002155714.1 I 0.702
Hsal_00444--XP_001122269.1_APIME Harpegnathos saltator Hsal_00444--XP_001122269.1_APIME N 0.702
Brh_R005100 Buceros rhinoceros Brh_R005100 I 0.702
LotgiG171288 Lottia gigantea LotgiG171288 I 0.702