CBN06605 (Caenorhabditis brenneri)
DM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00751 (DM) IPR001275 CBN06605 T168907_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CBN06605
M01925_2.00
Caenorhabditis brenneri
NWGTWKN

NMWACWN
PBM
Weirauch et al.(2014)
pTH9247
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CJA05633_CONSTRUCT
M01936_2.00
PBM CONSTRUCTS
NWGTWDN

NHWACWN
PBM
Weirauch et al.(2014)
pTH9344
0.972 0.979
CBG09413
M01924_2.00
Caenorhabditis briggsae
AATGTTTC

GAAACATT
PBM
Weirauch et al.(2014)
pTH8330
0.966 0.979
dmd-10
M00657_2.00
Caenorhabditis elegans
AWTGTTTC

GAAACAWT
PBM
Narasimhan et al.(2015)
pTH9142
0.963 0.957
WUBG_11979
M01922_2.00
Wuchereria bancrofti
ATGTWTCA

TGAWACAT
PBM
Weirauch et al.(2014)
pTH9296
0.950 0.851
Bm2567
M01923_2.00
Brugia malayi
NNNWGTTKHN

NDMAACWNNN
PBM
Weirauch et al.(2014)
pTH9246
0.950 0.851
dmd-3
M00658_2.00
Caenorhabditis elegans
NNWGTWDN

NHWACWNN
PBM
Narasimhan et al.(2015)
pTH10638
0.909 0.745
For this family, TFs with SR scores > 0.845 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01925_2.00 DM 36 82

DNA Binding Domains

Protein ID Domain From To Sequence
CBN06605 DM 36 82

Links

Other DM family TFs
Other Caenorhabditis brenneri TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R003280 Calypte anna Aan_R003280 I 0.000
Afo_R009791 Aptenodytes forsteri Afo_R009791 I 0.000
Alligator_sinensis_CCG014289.1 Alligator sinensis Alligator_sinensis_CCG014289.1 I 0.000
Brh_R006404 Buceros rhinoceros Brh_R006404 I 0.000
Cmyd_10015187 Chelonia mydas Cmyd_10015187 I 0.000
ENSAMEG00000003831 Ailuropoda melanoleuca ENSAMEG00000003831 I 0.000
ENSAMXG00000003090 Astyanax mexicanus ENSAMXG00000003090 N 0.000
ENSAMXG00000004244 Astyanax mexicanus ENSAMXG00000004244 I 0.000
ENSAPLG00000005213 Anas platyrhynchos ENSAPLG00000005213 I 0.000
ENSCJAG00000017819 Callithrix jacchus ENSCJAG00000017819 I 0.000
ENSCSAG00000014069 Chlorocebus sabaeus ENSCSAG00000014069 I 0.000
ENSFALG00000005745 Ficedula albicollis ENSFALG00000005745 I 0.000
ENSGMOG00000014402 Gadus morhua ENSGMOG00000014402 N 0.000
ENSLACG00000018995 Latimeria chalumnae ENSLACG00000018995 I 0.000
ENSLOCG00000001337 Lepisosteus oculatus ENSLOCG00000001337 I 0.000
ENSLOCG00000016218 Lepisosteus oculatus ENSLOCG00000016218 I 0.000
ENSMMUP00000023843 Macaca fascicularis ENSMMUP00000023843 I 0.000
ENSMPUG00000017680 Mustela putorius furo ENSMPUG00000017680 I 0.000
ENSOARG00000003547 Ovis aries ENSOARG00000003547 I 0.000
ENSONIG00000020250 Oreochromis niloticus ENSONIG00000020250 N 0.000
ENSORLG00000011602 Oryzias latipes ENSORLG00000011602 N 0.000
ENSP00000217026-D1 Bos grunniens ENSP00000217026-D1 I 0.000
ENSPANG00000023992 Papio anubis ENSPANG00000023992 I 0.000
ENSPFOG00000001128 Poecilia formosa ENSPFOG00000001128 N 0.000
ENSPPYG00000011022 Pongo abelii ENSPPYG00000011022 I 0.000
ENSPSIG00000016162 Pelodiscus sinensis ENSPSIG00000016162 I 0.000
ENSSHAG00000005654 Sarcophilus harrisii ENSSHAG00000005654 I 0.000
ENSTGUG00000004426 Taeniopygia guttata ENSTGUG00000004426 I 0.000
ENSXMAG00000007939 Xiphophorus maculatus ENSXMAG00000007939 N 0.000
Gfo_R005427 Geospiza fortis Gfo_R005427 I 0.000
myb Tetraodon nigroviridis ENSTNIG00000016319 I 0.000
myb Takifugu rubripes ENSTRUG00000016069 I 0.000
myb Danio rerio ENSDARG00000053666 I 0.000
Mybl2 Rattus norvegicus ENSRNOG00000007805 I 0.000
MYBL2 Pan troglodytes ENSPTRG00000013510 I 0.000
MYBL2 Tursiops truncatus ENSTTRG00000013493 I 0.000
MYBL2 Anolis carolinensis ENSACAG00000002463 I 0.000
MYBL2 Meleagris gallopavo ENSMGAG00000002972 I 0.000
MYBL2 Procavia capensis ENSPCAG00000004366 I 0.000
MYBL2 Felis catus ENSFCAG00000011141 I 0.000
MYBL2 Homo sapiens ENSG00000101057 D 0.000
MYBL2 Cavia porcellus ENSCPOG00000020458 I 0.000
MYBL2 Gallus gallus ENSGALG00000003503 I 0.000
MYBL2 Loxodonta africana ENSLAFG00000006698 I 0.000
MYBL2 Myotis lucifugus ENSMLUG00000016678 I 0.000
MYBL2 Canis familiaris ENSCAFG00000009336 I 0.000
MYBL2 Macaca mulatta ENSMMUG00000018137 I 0.000
MYBL2 Bos taurus ENSBTAG00000007783 I 0.000
MYBL2 Monodelphis domestica ENSMODG00000001228 I 0.000
Mybl2 Mus musculus ENSMUSG00000017861 D 0.000
MYBL2 Oryctolagus cuniculus ENSOCUG00000005775 I 0.000
MYBL2 Otolemur garnettii ENSOGAG00000007702 I 0.000
MYBL2 Equus caballus ENSECAG00000005925 I 0.000
mybl2b Danio rerio ENSDARG00000032264 I 0.000
mybl2b Gasterosteus aculeatus ENSGACG00000010763 N 0.000
mybl2b Takifugu rubripes ENSTRUG00000014997 N 0.000
mybl2b Tetraodon nigroviridis ENSTNIG00000007341 N 0.000
Myotis_brandtii_MYBL2_10025179 Myotis brandtii Myotis_brandtii_MYBL2_10025179 I 0.000
Ogr13963 Ophisaurus gracilis Ogr13963 I 0.000
Pvit_07752 Pogona vitticeps Pvit_07752 I 0.000
Tal_R007942 Tyto alba Tal_R007942 I 0.000