dmd-3 (Caenorhabditis elegans)
DM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00751 (DM) IPR001275 WBGene00012832 T169436_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
dmd-3
M00658_2.00		 Caenorhabditis elegans
NNWGTWDN
NHWACWNN		 PBM
Narasimhan et al.(2015)
pTH10638		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG09413
M01924_2.00 		Caenorhabditis briggsae
AATGTTTC
GAAACATT		 PBM
Weirauch et al.(2014)
pTH8330 		0.918 0.745
WUBG_11979
M01922_2.00 		Wuchereria bancrofti
ATGTWTCA
TGAWACAT		 PBM
Weirauch et al.(2014)
pTH9296 		0.917 0.766
Bm2567
M01923_2.00 		Brugia malayi
NNNWGTTKHN
NDMAACWNNN		 PBM
Weirauch et al.(2014)
pTH9246 		0.914 0.766
dmd-10
M00657_2.00 		Caenorhabditis elegans
AWTGTTTC
GAAACAWT		 PBM
Narasimhan et al.(2015)
pTH9142 		0.914 0.745
CBN06605
M01925_2.00 		Caenorhabditis brenneri
NWGTWKN
NMWACWN		 PBM
Weirauch et al.(2014)
pTH9247 		0.909 0.745
CJA05633_CONSTRUCT
M01936_2.00 		PBM CONSTRUCTS
NWGTWDN
NHWACWN		 PBM
Weirauch et al.(2014)
pTH9344 		0.909 0.745
For this family, TFs with SR scores > 0.845 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00658_2.00 DM 19 65

DNA Binding Domains

Protein ID Domain From To Sequence
Y43F8C.10a DM 15 60
Y43F8C.10a DM 113 159
Y43F8C.10b DM 19 65

Links

Other DM family TFs
Other Caenorhabditis elegans TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CJA05020 Caenorhabditis japonica CJA05020 I 0.965
CJA37832 Caenorhabditis japonica CJA37832 I 0.965
CRE06043 Caenorhabditis remanei CRE06043 N 0.964
ANCCAN_13991 Ancylostoma caninum ANCCAN_13991 I 0.964
CBN07630 Caenorhabditis brenneri CBN07630 N 0.964
ANCDUO_19569 Ancylostoma duodenale ANCDUO_19569 I 0.964
TELCIR_05158 Teladorsagia circumcincta TELCIR_05158 I 0.964
NECAME_07661 Necator americanus NECAME_07661 I 0.964
CBG05690 Caenorhabditis briggsae CBG05690 N 0.963
OESDEN_09202 Oesophagostomum dentatum OESDEN_09202 I 0.961
L898_g30067 Steinernema monticolum L898_g30067 I 0.959
L892_g27879 Steinernema scapterisci L892_g27879 I 0.959
ANCCEY_01474 Ancylostoma ceylanicum ANCCEY_01474 N 0.955
NBR_0000071001 Nippostrongylus brasiliensis NBR_0000071001 N 0.951
HPLM_0001382501 Haemonchus placei HPLM_0001382501 N 0.951
nAv.1.0.1.g01085 Acanthocheilonema viteae nAv.1.0.1.g01085 I 0.950
nOo.2.0.1.g12565 Onchocerca ochengi nOo.2.0.1.g12565 I 0.950
BTMF_0001659501 Brugia timori BTMF_0001659501 I 0.950
nDi.2.2.2.g10419 Dirofilaria immitis nDi.2.2.2.g10419 I 0.950
ASIM_0000241101 Anisakis simplex ASIM_0000241101 I 0.946
ASIM_0000264301 Anisakis simplex ASIM_0000264301 I 0.946
Hba_18486 Heterorhabditis bacteriophora Hba_18486 N 0.945
L889_g14208 Steinernema feltiae L889_g14208 N 0.943
EVEC_0001283901 Enterobius vermicularis EVEC_0001283901 N 0.937
SMUV_0001103601 Syphacia muris SMUV_0001103601 N 0.933
EEL_0000847601 Elaeophora elaphi EEL_0000847601 N 0.932
LOAG_13296 Loa loa LOAG_13296 N 0.932
WBGene00242840 Onchocerca volvulus WBGene00242840 N 0.932
ALUE_0001885601 Ascaris lumbricoides ALUE_0001885601 N 0.931
Bm6550 Brugia malayi Bm6550 N 0.931
TCLT_0000242201 Thelazia callipaeda TCLT_0000242201 N 0.929
DME_0000028701 Dracunculus medinensis DME_0000028701 N 0.927
SVE_1703300 Strongyloides venezuelensis SVE_1703300 I 0.924
L893_g31098 Steinernema glaseri L893_g31098 I 0.923
NBR_0000774001 Nippostrongylus brasiliensis NBR_0000774001 I 0.922
BXY_0200700 Bursaphelenchus xylophilus BXY_0200700 I 0.921
L596_g998 Steinernema carpocapsae L596_g998 I 0.920
L889_g10733 Steinernema feltiae L889_g10733 I 0.920
L898_g33808 Steinernema monticolum L898_g33808 I 0.920
L892_g22881 Steinernema scapterisci L892_g22881 I 0.920
Hba_18605 Heterorhabditis bacteriophora Hba_18605 I 0.918
CBG09413 Caenorhabditis briggsae CBG09413 D 0.918
DME_0001004201 Dracunculus medinensis DME_0001004201 I 0.918
WBGene00242643 Onchocerca volvulus WBGene00242643 I 0.917
nOo.2.0.1.g05035 Onchocerca ochengi nOo.2.0.1.g05035 I 0.917
WUBG_11979 Wuchereria bancrofti WUBG_11979 D 0.917
nDi.2.2.2.g08811 Dirofilaria immitis nDi.2.2.2.g08811 I 0.917
TCLT_0000243901 Thelazia callipaeda TCLT_0000243901 I 0.917
LOAG_11460 Loa loa LOAG_11460 I 0.917
EVEC_0001123001 Enterobius vermicularis EVEC_0001123001 I 0.917
EEL_0000689901 Elaeophora elaphi EEL_0000689901 I 0.917
nAv.1.0.1.g09212 Acanthocheilonema viteae nAv.1.0.1.g09212 I 0.917
BXY_0352300 Bursaphelenchus xylophilus BXY_0352300 I 0.917
SPAL_0001233100 Strongyloides papillosus SPAL_0001233100 I 0.915
SVE_0753200 Strongyloides venezuelensis SVE_0753200 I 0.915
ASIM_0001608201 Anisakis simplex ASIM_0001608201 I 0.914
nLs.2.1.2.g05589 Litomosoides sigmodontis nLs.2.1.2.g05589 I 0.914
Bm2567 Brugia malayi Bm2567 D 0.914
dmd-10 Caenorhabditis elegans WBGene00007929 D 0.914
BTMF_0001653601 Brugia timori BTMF_0001653601 I 0.914
PTRK_0001597400 Parastrongyloides trichosuri PTRK_0001597400 I 0.912
ASU_15182 Ascaris suum ASU_15182 N 0.911
CBN06605 Caenorhabditis brenneri CBN06605 D 0.909
CJA05633_CONSTRUCT PBM CONSTRUCTS CJA05633_CONSTRUCT D 0.909
CRE31027 Caenorhabditis remanei CRE31027 I 0.909
RSKR_0000247700 Rhabditophanes kr3021 RSKR_0000247700 N 0.889
PTRK_0001116100 Parastrongyloides trichosuri PTRK_0001116100 N 0.888
SPAL_0001355700 Strongyloides papillosus SPAL_0001355700 N 0.885
SSTP_0000839900 Strongyloides stercoralis SSTP_0000839900 N 0.885
SMUV_0000467601 Syphacia muris SMUV_0000467601 N 0.876
SSTP_0000731600 Strongyloides stercoralis SSTP_0000731600 N 0.876
TCNE_0001625401 Toxocara canis TCNE_0001625401 N 0.852
PEQ_0000560001 Parascaris equorum PEQ_0000560001 N 0.846