L892_g27879 (Steinernema scapterisci)
DM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00751 (DM) IPR001275 L892_g27879 T169871_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
dmd-3
M00658_2.00 		Caenorhabditis elegans
NNWGTWDN
NHWACWNN		 PBM
Narasimhan et al.(2015)
pTH10638 		0.959 0.936
CBG09413
M01924_2.00 		Caenorhabditis briggsae
AATGTTTC
GAAACATT		 PBM
Weirauch et al.(2014)
pTH8330 		0.923 0.766
WUBG_11979
M01922_2.00 		Wuchereria bancrofti
ATGTWTCA
TGAWACAT		 PBM
Weirauch et al.(2014)
pTH9296 		0.923 0.766
Bm2567
M01923_2.00 		Brugia malayi
NNNWGTTKHN
NDMAACWNNN		 PBM
Weirauch et al.(2014)
pTH9246 		0.920 0.766
dmd-10
M00657_2.00 		Caenorhabditis elegans
AWTGTTTC
GAAACAWT		 PBM
Narasimhan et al.(2015)
pTH9142 		0.919 0.766
CBN06605
M01925_2.00 		Caenorhabditis brenneri
NWGTWKN
NMWACWN		 PBM
Weirauch et al.(2014)
pTH9247 		0.916 0.766
CJA05633_CONSTRUCT
M01936_2.00 		PBM CONSTRUCTS
NWGTWDN
NHWACWN		 PBM
Weirauch et al.(2014)
pTH9344 		0.916 0.745
For this family, TFs with SR scores > 0.845 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L892_g27879.t1 DM 71 117
L892_g27879.t2 DM 18 63
L892_g27879.t2 DM 84 130

Links

Other DM family TFs
Other Steinernema scapterisci TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L898_g30067 Steinernema monticolum L898_g30067 I 0.966
L889_g14208 Steinernema feltiae L889_g14208 N 0.965
TELCIR_05158 Teladorsagia circumcincta TELCIR_05158 I 0.960
ANCCAN_13991 Ancylostoma caninum ANCCAN_13991 I 0.960
NECAME_07661 Necator americanus NECAME_07661 I 0.960
ANCDUO_19569 Ancylostoma duodenale ANCDUO_19569 I 0.960
dmd-3 Caenorhabditis elegans WBGene00012832 D 0.959
CJA37832 Caenorhabditis japonica CJA37832 I 0.959
CJA05020 Caenorhabditis japonica CJA05020 I 0.959
OESDEN_09202 Oesophagostomum dentatum OESDEN_09202 I 0.957
ALUE_0001885601 Ascaris lumbricoides ALUE_0001885601 N 0.957
ASIM_0000264301 Anisakis simplex ASIM_0000264301 I 0.954
EVEC_0001283901 Enterobius vermicularis EVEC_0001283901 N 0.954
DME_0000028701 Dracunculus medinensis DME_0000028701 N 0.954
ASIM_0000241101 Anisakis simplex ASIM_0000241101 I 0.954
Bm6550 Brugia malayi Bm6550 N 0.953
EEL_0000847601 Elaeophora elaphi EEL_0000847601 N 0.952
LOAG_13296 Loa loa LOAG_13296 N 0.952
SMUV_0001103601 Syphacia muris SMUV_0001103601 N 0.952
WBGene00242840 Onchocerca volvulus WBGene00242840 N 0.952
TCLT_0000242201 Thelazia callipaeda TCLT_0000242201 N 0.951
ANCCEY_01474 Ancylostoma ceylanicum ANCCEY_01474 N 0.951
HPLM_0001382501 Haemonchus placei HPLM_0001382501 N 0.950
NBR_0000071001 Nippostrongylus brasiliensis NBR_0000071001 N 0.948
Hba_18486 Heterorhabditis bacteriophora Hba_18486 N 0.947
nDi.2.2.2.g10419 Dirofilaria immitis nDi.2.2.2.g10419 I 0.945
nAv.1.0.1.g01085 Acanthocheilonema viteae nAv.1.0.1.g01085 I 0.945
BTMF_0001659501 Brugia timori BTMF_0001659501 I 0.945
nOo.2.0.1.g12565 Onchocerca ochengi nOo.2.0.1.g12565 I 0.945
ASU_15182 Ascaris suum ASU_15182 N 0.942
CBN07630 Caenorhabditis brenneri CBN07630 N 0.942
CRE06043 Caenorhabditis remanei CRE06043 N 0.942
CBG05690 Caenorhabditis briggsae CBG05690 N 0.940
SVE_1703300 Strongyloides venezuelensis SVE_1703300 I 0.936
L893_g31098 Steinernema glaseri L893_g31098 I 0.929
NBR_0000774001 Nippostrongylus brasiliensis NBR_0000774001 I 0.927
BXY_0200700 Bursaphelenchus xylophilus BXY_0200700 I 0.926
L898_g33808 Steinernema monticolum L898_g33808 I 0.925
BXY_0352300 Bursaphelenchus xylophilus BXY_0352300 I 0.925
L889_g10733 Steinernema feltiae L889_g10733 I 0.925
L892_g22881 Steinernema scapterisci L892_g22881 I 0.925
L596_g998 Steinernema carpocapsae L596_g998 I 0.925
DME_0001004201 Dracunculus medinensis DME_0001004201 I 0.924
Hba_18605 Heterorhabditis bacteriophora Hba_18605 I 0.924
TCLT_0000243901 Thelazia callipaeda TCLT_0000243901 I 0.923
EEL_0000689901 Elaeophora elaphi EEL_0000689901 I 0.923
nDi.2.2.2.g08811 Dirofilaria immitis nDi.2.2.2.g08811 I 0.923
CBG09413 Caenorhabditis briggsae CBG09413 D 0.923
EVEC_0001123001 Enterobius vermicularis EVEC_0001123001 I 0.923
nOo.2.0.1.g05035 Onchocerca ochengi nOo.2.0.1.g05035 I 0.923
WBGene00242643 Onchocerca volvulus WBGene00242643 I 0.923
LOAG_11460 Loa loa LOAG_11460 I 0.923
nAv.1.0.1.g09212 Acanthocheilonema viteae nAv.1.0.1.g09212 I 0.923
WUBG_11979 Wuchereria bancrofti WUBG_11979 D 0.923
SPAL_0001233100 Strongyloides papillosus SPAL_0001233100 I 0.921
SVE_0753200 Strongyloides venezuelensis SVE_0753200 I 0.921
ASIM_0001608201 Anisakis simplex ASIM_0001608201 I 0.920
nLs.2.1.2.g05589 Litomosoides sigmodontis nLs.2.1.2.g05589 I 0.920
Bm2567 Brugia malayi Bm2567 D 0.920
BTMF_0001653601 Brugia timori BTMF_0001653601 I 0.920
dmd-10 Caenorhabditis elegans WBGene00007929 D 0.919
PTRK_0001597400 Parastrongyloides trichosuri PTRK_0001597400 I 0.918
CRE31027 Caenorhabditis remanei CRE31027 I 0.916
CBN06605 Caenorhabditis brenneri CBN06605 D 0.916
CJA05633_CONSTRUCT PBM CONSTRUCTS CJA05633_CONSTRUCT D 0.916
PTRK_0001116100 Parastrongyloides trichosuri PTRK_0001116100 N 0.912
SPAL_0001355700 Strongyloides papillosus SPAL_0001355700 N 0.910
SSTP_0000839900 Strongyloides stercoralis SSTP_0000839900 N 0.910
RSKR_0000247700 Rhabditophanes kr3021 RSKR_0000247700 N 0.898
PEQ_0000560001 Parascaris equorum PEQ_0000560001 N 0.896
TCNE_0001625401 Toxocara canis TCNE_0001625401 N 0.885
SMUV_0000467601 Syphacia muris SMUV_0000467601 N 0.877
SSTP_0000731600 Strongyloides stercoralis SSTP_0000731600 N 0.877