CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PPA11400
(
Pristionchus pacificus
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00751 (DM)
IPR001275
PPA11400
T169389_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dmd-9
M00661_2.00
Caenorhabditis elegans
ACCTTT
AAAGGT
PBM
Narasimhan et al.(2015)
pTH8999
0.870
0.689
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA11400
DM
58
102
RTLFCRKCEGHGQQVILKGHASKCPYNNCTCKTCANVMSMRANAI
Links
Other
DM
family TFs
Other
Pristionchus pacificus
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy