CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
BXY_0352300
(
Bursaphelenchus xylophilus
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00751 (DM)
IPR001275
BXY_0352300
T169730_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dmd-3
M00658_2.00
Caenorhabditis elegans
NNWGTWDN
NHWACWNN
PBM
Narasimhan et al.(2015)
pTH10638
0.917
0.723
WUBG_11979
M01922_2.00
Wuchereria bancrofti
ATGTWTCA
TGAWACAT
PBM
Weirauch et al.(2014)
pTH9296
0.895
0.660
Bm2567
M01923_2.00
Brugia malayi
NNNWGTTKHN
NDMAACWNNN
PBM
Weirauch et al.(2014)
pTH9246
0.892
0.638
CBG09413
M01924_2.00
Caenorhabditis briggsae
AATGTTTC
GAAACATT
PBM
Weirauch et al.(2014)
pTH8330
0.884
0.638
dmd-10
M00657_2.00
Caenorhabditis elegans
AWTGTTTC
GAAACAWT
PBM
Narasimhan et al.(2015)
pTH9142
0.882
0.638
CBN06605
M01925_2.00
Caenorhabditis brenneri
NWGTWKN
NMWACWN
PBM
Weirauch et al.(2014)
pTH9247
0.881
0.638
CJA05633_CONSTRUCT
M01936_2.00
PBM CONSTRUCTS
NWGTWDN
NHWACWN
PBM
Weirauch et al.(2014)
pTH9344
0.881
0.638
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BXY_0352300.1
DM
13
59
RMPHCQRCAQHNVKNRLRGHKQVCPFKDCTCPKCLVVIERQRLMADQ
Links
Other
DM
family TFs
Other
Bursaphelenchus xylophilus
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy