CGI_10023990 (Crassostrea gigas)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF16422 (COE1_DBD) (none) CGI_10023990 T174467_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
EBF3
M10461_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF_Q6
0.805 0.805
Ebf1
M09045_2.00
Mus musculus
DBYCCCWRGGGAV

BTCCCYWGGGRVH
Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A
0.801 0.801
Ebf1
M09527_2.00
Mus musculus
DBTCCCHDGGGA

TCCCHDGGGAVH
Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978
0.801 0.801
Ebf1
M10469_2.00
Mus musculus
VYMHVYYCYYBRGGGAVTHKHB

VDMDABTCCCYVRRGRRBDKRB
Transfac
Matys et al.(2006)
V$OLF1_01
0.801 0.801
EBF4
M10460_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_02
0.796 0.796
Ebf4
M10468_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_01
0.792 0.792
kn
M03721_2.00
Drosophila melanogaster
BWATTCCCHDGGGAATWV

BWATTCCCHDGGGAATWV
SELEX
Nitta et al.(2015)
kn_1
0.774 0.774
Ebf2
M10467_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COE2_01
0.761 0.761
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC33090 EBF1 22 248

Links

Other EBF1 family TFs
Other Crassostrea gigas TFs

294 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Alligator_sinensis_CCG001391.4 Alligator sinensis Alligator_sinensis_CCG001391.4 I 0.000
MAZ Anolis carolinensis ENSACAG00000014698 I 0.000
ENSAMEG00000014864 Ailuropoda melanoleuca ENSAMEG00000014864 I 0.000
ENSBTAP00000026016-D1 Bos grunniens ENSBTAP00000026016-D1 I 0.000
MAZ Cavia porcellus ENSCPOG00000019886 I 0.000
MAZ Homo sapiens ENSG00000103495 D 0.000
ENSGACG00000014840 Gasterosteus aculeatus ENSGACG00000014840 I 0.000
ENSGMOG00000001761 Gadus morhua ENSGMOG00000001761 I 0.000
Maz Mus musculus ENSMUSG00000030678 D 0.000
ENSNLEG00000007559 Nomascus leucogenys ENSNLEG00000007559 I 0.000
MAZ Otolemur garnettii ENSOGAG00000033940 I 0.000
MAZ Pan troglodytes ENSPTRG00000007968 I 0.000
Maz Rattus norvegicus ENSRNOG00000055082 I 0.000
ENSSHAG00000009478 Sarcophilus harrisii ENSSHAG00000009478 I 0.000
MAZ Sus scrofa ENSSSCG00000025321 I 0.000
ENSSTOG00000027842 Ictidomys tridecemlineatus ENSSTOG00000027842 I 0.000
Myotis_brandtii_MAZ_10014461 Myotis brandtii Myotis_brandtii_MAZ_10014461 I 0.000
Pvit_12096 Pogona vitticeps Pvit_12096 I 0.000