CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA028053
(
Oryza indica
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
BGIOSGA028053
T179050_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA028053-PA
FAR1
102
193
TFYIAYAGRVGFSVRIARSRRSKCNESIIMLRFVCSKEGFSKEKHVVAGKKTRKRPASIREGCNAMLEVLRRGDSKWIVTKLVKEHNHEVGM
BGIOSGA028053-PA
FAR1
224
315
TFYYSYATRVGFEARVRQSRKSQDESLKMLKLVCSRHRYHSGRETNGGDPKRVQALDPSRDGCDALFEIIRKDRDAWTVSKLILEHTHELNP
Links
Other
FAR1
family TFs
Other
Oryza indica
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OB08G14200
Oryza brachyantha
OB08G14200
N
0.966
Sb07g004380
Sorghum bicolor
Sb07g004380
N
0.933
GRMZM2G302323
Zea mays
GRMZM2G302323
N
0.922
Si015801m.g
Setaria italica
Si015801m.g
N
0.910
Pavir.Fa01859
Panicum virgatum
Pavir.Fa01859
N
0.905
Pavir.Fb00442
Panicum virgatum
Pavir.Fb00442
N
0.899
Traes_5BL_CCDB985ED
Triticum aestivum
Traes_5BL_CCDB985ED
N
0.872
Traes_5AL_0DF34352F
Triticum aestivum
Traes_5AL_0DF34352F
N
0.866
Traes_5DL_4ABC24378
Triticum aestivum
Traes_5DL_4ABC24378
N
0.866
MLOC_56869
Hordeum vulgare
MLOC_56869
N
0.866
PDK_20s1556451g004
Phoenix dactylifera
PDK_20s1556451g004
N
0.794