CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORGLA07G0123500
(
Oryza glaberrima
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
ORGLA07G0123500
T179972_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA07G0123500.1
FAR1
82
179
EFYKAYAARLGFVVRKSNKSKNSRHTVTRRLFVCSKQGFRQEPKKPPQDEATAASPPPPRCPDWRTGCLASLTIKLLPSANAFRVTDFAAEHNHPLAS
ORGLA07G0123500.1
FAR1
225
326
AFYNRYAEHVGFSVRRSYKKRKRGVIVSRIFVCSREGVSDRAKHESIAIVSNNASTGPSGTPRPGPPPTRTGCQARMVIKITPCRTYRVAKFVPEHNHPLAN
Links
Other
FAR1
family TFs
Other
Oryza glaberrima
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA024272
Oryza indica
BGIOSGA024272
N
0.994
OS07G0496300
Oryza sativa
OS07G0496300
N
0.989
Traes_2AS_1683BEFD0
Triticum aestivum
Traes_2AS_1683BEFD0
N
0.955
Traes_2BS_C9299F976
Triticum aestivum
Traes_2BS_C9299F976
N
0.949
BRADI1G26980
Brachypodium distachyon
BRADI1G26980
N
0.949
MLOC_2737
Hordeum vulgare
MLOC_2737
N
0.944
GRMZM2G406651
Zea mays
GRMZM2G406651
N
0.932
Pavir.J10702
Panicum virgatum
Pavir.J10702
N
0.927
Pavir.Ba00914
Panicum virgatum
Pavir.Ba00914
N
0.927
Sb02g033910
Sorghum bicolor
Sb02g033910
N
0.927
Si033400m.g
Setaria italica
Si033400m.g
N
0.887
OLONG_010536
Oryza longistaminata
OLONG_010536
N
0.881