CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_13s0047g00330
(
Vitis vinifera
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
VIT_13s0047g00330
T180856_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_13s0047g00330.t01
FAR1
58
134
TFYDQYARRVGFSTHVGQFSRTKPDGPIISWDFACSREVFKRKNVESCNAMLRIERKDSDNWIVTKFVEDHNHSTIT
Links
Other
FAR1
family TFs
Other
Vitis vinifera
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g035792m.g
Citrus sinensis
orange1.1g035792m.g
N
0.844
Ciclev10000255m.g
Citrus clementina
Ciclev10000255m.g
N
0.831
GLYMA08G24400
Glycine max
GLYMA08G24400
N
0.816
PRUPE_ppa001310mg
Prunus persica
PRUPE_ppa001310mg
N
0.805
Gorai.012G021400
Gossypium raimondii
Gorai.012G021400
N
0.805
SapurV1A.0070s0640
Salix purpurea
SapurV1A.0070s0640
N
0.792
Gorai.011G224000
Gossypium raimondii
Gorai.011G224000
N
0.792
POPTR_0008s01240
Populus trichocarpa
POPTR_0008s01240
N
0.779
MDP0000318097
Malus domestica
MDP0000318097
N
0.779
cassava1556.valid.m1
Manihot esculenta
cassava1556.valid.m1
N
0.766
Solyc01g096850.2
Solanum lycopersicum
Solyc01g096850.2
N
0.766
TCM_044608
Theobroma cacao
TCM_044608
N
0.766
mgf011248m
Mimulus guttatus
mgf011248m
N
0.740
mgf005364m
Mimulus guttatus
mgf005364m
N
0.740
gene00378-v1.0-hybrid
Fragaria vesca
gene00378-v1.0-hybrid
N
0.714