CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr6G36080_001
(
Musa acuminata
)
FAR1,GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
PF00320 (GATA)
IPR004330
IPR000679
GSMUA_Achr6G36080_001
T182282_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr6P36080_001
GATA
26
63
CHNCGISAKLTCHMRSGPEGRRTLCNACGIAWRKGKQR
GSMUA_Achr6P36080_001
FAR1
96
184
EFYNRYAGMIGFSVRKGWIDKSSDKITRSRTLVCSREGFRKDKKGAKEVKKPRPETRIGCPARLTIKLRPSGTYRVTEFVPDHNHQPAP
Links
Other
FAR1,GATA
family TFs
Other
Musa acuminata
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OS03G0181600
Oryza sativa
OS03G0181600
N
0.800
BGIOSGA011986
Oryza indica
BGIOSGA011986
N
0.800
ORGLA03G0057700
Oryza glaberrima
ORGLA03G0057700
N
0.800
OB03G16050
Oryza brachyantha
OB03G16050
N
0.789
Traes_4AS_124CCE880
Triticum aestivum
Traes_4AS_124CCE880
N
0.784
Traes_4DL_C77385A0D
Triticum aestivum
Traes_4DL_C77385A0D
N
0.776
GSMUA_Achr2G15020_001
Musa acuminata
GSMUA_Achr2G15020_001
N
0.776