CRE31245 (Caenorhabditis remanei)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00250 (Forkhead) IPR001766 CRE31245 T184968_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pha-4
M08123_2.00 		Caenorhabditis elegans
WRWGYAAAYA
TRTTTRCWYW		 ChIP-seq
Mathelier et al.(2014)
MA0546.1 		0.693 0.779
pha-4
M08201_2.00 		Caenorhabditis elegans
GTAAACAR
YTGTTTAC		 ChIP-seq
Contrino et al.(2012)
Mw164 		0.693 0.779
pha-4
M09548_2.00 		Caenorhabditis elegans
RYAMAYAN
NTRTKTRY		 Misc
Heinz et al.(2010)
cElegans-Embryos-PHA4_modEncode 		0.693 0.779
Foxa2
M00162_2.00 		Mus musculus
GTAAAYAW
WTRTTTAC		 PBM
Badis et al.(2009)
Foxa2_2830 		0.682 0.733
FOXA2
M04815_2.00 		Homo sapiens
NHVNRYMAATATTKACNNDN
NHNNGTMAATATTKRYNBDN		 SELEX
Yin et al.(2017)
FOXA2_eDBD_HT-SELEX 		0.682 0.733
Foxa2
M08121_2.00 		Mus musculus
TRTTTACWYWDN
NHWRWGTAAAYA		 ChIP-seq
Mathelier et al.(2014)
MA0047.2 		0.682 0.733
FOXA2
M07959_2.00 		Homo sapiens
NNWRWGYAAAYANNN
NNNTRTTTRCWYWNN		 ChIP-seq
Gerstein et al.(2012)
HepG2_FOXA2_HudsonAlpha 		0.682 0.733
FOXA2
M09088_2.00 		Homo sapiens
NHWRWGTAAACA
TGTTTACWYWDN		 Misc
Kulakovskiy et al.(2013)
FOXA2_HUMAN.H11MO.0.A 		0.682 0.733
Foxa2
M09104_2.00 		Mus musculus
BNHTRTTKACWYW
WRWGTMAAYADNV		 Misc
Kulakovskiy et al.(2013)
FOXA2_MOUSE.H11MO.0.A 		0.682 0.733
FOXA2
M09542_2.00 		Homo sapiens
WVWGTMAACANV
BNTGTTKACWBW		 Misc
Heinz et al.(2010)
Liver-Foxa2_GSE25694 		0.682 0.733
FOXA2
M10540_2.00 		Homo sapiens
WAARYAAAYADKNMV
BKNMHTRTTTRYTTW		 Transfac
Matys et al.(2006)
V$HNF3B_01 		0.682 0.733
FOXA2
M10541_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF3B_Q6 		0.682 0.733
AAA20679
M10575_2.00 		Xenopus laevis
WNWGTMAACAWWMW
WKWWTGTTKACWNW		 Transfac
Matys et al.(2006)
V$XFD3_01 		0.682 0.733
FOXA2
M04816_2.00 		Homo sapiens
NWRNRYMAATATTKACWNWN
NWNWGTMAATATTKRYNYWN		 SELEX
Yin et al.(2017)
FOXA2_eDBD_Methyl-HT-SELEX 		0.682 0.733
FOXA1
M04817_2.00 		Homo sapiens
NTRTKTACMYWN
NWRKGTAMAYAN		 SELEX
Yin et al.(2017)
FOXA1_eDBD_HT-SELEX 		0.671 0.733
FOXA1
M04819_2.00 		Homo sapiens
BVYTAWGTAAACAAWN
NWTTGTTTACWTARBV		 SELEX
Yin et al.(2017)
FOXA1_FL_HT-SELEX_1 		0.671 0.733
FOXA1
M04820_2.00 		Homo sapiens
HWRWRYAAATATTKACWYWR
YWRWGTMAATATTTRYWYWD		 SELEX
Yin et al.(2017)
FOXA1_FL_HT-SELEX_2 		0.671 0.733
FOXA1
M08117_2.00 		Homo sapiens
NNNNTRTTTACWYWD
HWRWGTAAAYANNNN		 ChIP-seq
Mathelier et al.(2014)
MA0148.3 		0.671 0.733
FOXA1
M07960_2.00 		Homo sapiens
NNYWRWGYAAACANN
NNTGTTTRCWYWRNN		 ChIP-seq
Gerstein et al.(2012)
ECC-1_FOXA1_HudsonAlpha 		0.671 0.733
FOXA1
M07961_2.00 		Homo sapiens
HWRWGTAAAYA
TRTTTACWYWD		 ChIP-seq
Gerstein et al.(2012)
HepG2_FOXA1_HudsonAlpha 		0.671 0.733
FOXA1
M07962_2.00 		Homo sapiens
NWVWGTAAACA
TGTTTACWBWN		 ChIP-seq
Gerstein et al.(2012)
T-47D_FOXA1_HudsonAlpha 		0.671 0.733
FOXA1
M08199_2.00 		Homo sapiens
BWRDGTAAACANN
NNTGTTTACHYWV		 ChIP-seq
Contrino et al.(2012)
Mv69 		0.671 0.733
FOXA1
M08028_2.00 		Homo sapiens
WRWRYAAAYA
TRTTTRYWYW		 ChIP-seq
Chen et al.(2011)
GSE15244_FoxA1 		0.671 0.733
FOXA1
M09090_2.00 		Homo sapiens
VHWRWGTAAACA
TGTTTACWYWDB		 Misc
Kulakovskiy et al.(2013)
FOXA1_HUMAN.H11MO.0.A 		0.671 0.733
Foxa1
M09103_2.00 		Mus musculus
TRTTKACWYW
WRWGTMAAYA		 Misc
Kulakovskiy et al.(2013)
FOXA1_MOUSE.H11MO.0.A 		0.671 0.733
FOXA1
M09544_2.00 		Homo sapiens
WGCCAARRYAAAYANN
NNTRTTTRYYTTGGCW		 Misc
Heinz et al.(2010)
LNCAP-FOXA1_GSE27824_2 		0.671 0.733
FOXA1
M09543_2.00 		Homo sapiens
WRWGTAAACA
TGTTTACWYW		 Misc
Heinz et al.(2010)
LNCAP-FOXA1_GSE27824_1 		0.671 0.733
FOXA1
M09545_2.00 		Homo sapiens
WRWGTAAAYA
TRTTTACWYW		 Misc
Heinz et al.(2010)
MCF7-FOXA1_GSE26831 		0.671 0.733
FOXA1
M10542_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXA1_02 		0.671 0.733
FOXA1
M10543_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXA1_03 		0.671 0.733
FOXA1
M10544_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF3A_01 		0.671 0.733
FOXA1
M10545_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF3ALPHA_Q6 		0.671 0.733
FOXA1
M10546_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF3A_Q6 		0.671 0.733
FOXA1
M04818_2.00 		Homo sapiens
NWRDGYMAAYAW
WTRTTKRCHYWN		 SELEX
Yin et al.(2017)
FOXA1_eDBD_Methyl-HT-SELEX 		0.671 0.733
FOXA1
M04821_2.00 		Homo sapiens
BVYTAWGTAAACAAWV
BWTTGTTTACWTARBV		 SELEX
Yin et al.(2017)
FOXA1_FL_Methyl-HT-SELEX_1 		0.671 0.733
FOXA1
M04822_2.00 		Homo sapiens
YTRWRYAAATATTTACWYAR
YTRWGTAAATATTTRYWYAR		 SELEX
Yin et al.(2017)
FOXA1_FL_Methyl-HT-SELEX_2 		0.671 0.733
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE31245 Forkhead 253 342

Links

Other Forkhead family TFs
Other Caenorhabditis remanei TFs

172 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE31246 Caenorhabditis remanei CRE31246 I 0.903
scaffold640-EXSNAP2012.6 Pristionchus exspectatus scaffold640-EXSNAP2012.6 I 0.722
CRE21246 Caenorhabditis remanei CRE21246 I 0.709
PPA14054 Pristionchus pacificus PPA14054 I 0.705
ANCCEY_10503 Ancylostoma ceylanicum ANCCEY_10503 I 0.699
L596_g12824 Steinernema carpocapsae L596_g12824 I 0.699
ANCCAN_19316 Ancylostoma caninum ANCCAN_19316 I 0.699
ACAC_0000125401 Angiostrongylus cantonensis ACAC_0000125401 I 0.699
ANCDUO_11819 Ancylostoma duodenale ANCDUO_11819 I 0.699
DICVIV_05656 Dictyocaulus viviparus DICVIV_05656 I 0.699
NBR_0000286701 Nippostrongylus brasiliensis NBR_0000286701 I 0.699
ANCCEY_13912 Ancylostoma ceylanicum ANCCEY_13912 I 0.699
HPLM_0000886501 Haemonchus placei HPLM_0000886501 I 0.699
HCOI00059300 Haemonchus contortus HCOI00059300 I 0.699
CJA10331 Caenorhabditis japonica CJA10331 I 0.696
L898_g6376 Steinernema monticolum L898_g6376 I 0.695
CBG05577 Caenorhabditis briggsae CBG05577 I 0.695
SNAPOd2T00010669001 Oikopleura dioica SNAPOd2T00010669001 I 0.695
pha-4 Caenorhabditis elegans WBGene00004013 D 0.693
HelroG93421 Helobdella robusta HelroG93421 I 0.691
L892_g1881 Steinernema scapterisci L892_g1881 I 0.686
TELCIR_00504 Teladorsagia circumcincta TELCIR_00504 I 0.684
FOXA2 Loxodonta africana ENSLAFG00000026345 I 0.684
Foxa2 Mus musculus ENSMUSG00000037025 D 0.682
ENSOANG00000015108 Ornithorhynchus anatinus ENSOANG00000015108 I 0.682
ENSLOCG00000016870 Lepisosteus oculatus ENSLOCG00000016870 I 0.682
foxa2.L Xenopus laevis XB-GENE-865381 I 0.682
ENSMPUG00000001166 Mustela putorius furo ENSMPUG00000001166 I 0.682
foxa4.L Xenopus laevis XB-GENE-865612 I 0.682
ENSMEUG00000013519 Macropus eugenii ENSMEUG00000013519 I 0.682
FOXA2 Monodelphis domestica ENSMODG00000006213 I 0.682
FOXA2 Ochotona princeps ENSOPRG00000006139 I 0.682
FOXA2 Sus scrofa ENSSSCG00000007114 I 0.682
ENSSHAG00000014905 Sarcophilus harrisii ENSSHAG00000014905 I 0.682
ENSP00000315955-D1 Bos grunniens ENSP00000315955-D1 I 0.682
ENSSTOG00000020150 Ictidomys tridecemlineatus ENSSTOG00000020150 I 0.682
FOXA2 Taeniopygia guttata ENSTGUG00000007523 I 0.682
ENSTSYG00000005803 Tarsius syrichta ENSTSYG00000005803 I 0.682
Aan_R010229 Calypte anna Aan_R010229 I 0.682
Foxa2 Rattus norvegicus ENSRNOG00000013133 I 0.682
Myotis_brandtii_Foxa2_10017244 Myotis brandtii Myotis_brandtii_Foxa2_10017244 I 0.682
foxa4 Xenopus tropicalis XB-GENE-486455 I 0.682
FOXA2 Otolemur garnettii ENSOGAG00000033297 I 0.682
FOXA2 Oryctolagus cuniculus ENSOCUG00000007368 I 0.682
foxa2 Xenopus tropicalis XB-GENE-480476 I 0.682
ENSPANG00000011847 Papio anubis ENSPANG00000011847 I 0.682
AAA20679 Xenopus laevis AAA20679 D 0.682
AAD03479 Xenopus laevis AAD03479 I 0.682
ENSOARG00000005070 Ovis aries ENSOARG00000005070 I 0.682
FOXA2 Macaca mulatta ENSMMUG00000010410 I 0.682
ENSCPOG00000027068 Cavia porcellus ENSCPOG00000027068 I 0.682
FOXA2 Homo sapiens ENSG00000125798 D 0.682
FOXA2 Felis catus ENSFCAG00000012368 I 0.682
ENSFALG00000011663 Ficedula albicollis ENSFALG00000011663 I 0.682
FOXA2 Callithrix jacchus ENSCJAG00000005785 I 0.682
FOXA2 Bos taurus ENSBTAG00000012407 I 0.682
ENSLACG00000008510 Latimeria chalumnae ENSLACG00000008510 I 0.682
ENSAPLG00000014329 Anas platyrhynchos ENSAPLG00000014329 I 0.682
ENSAMEG00000015802 Ailuropoda melanoleuca ENSAMEG00000015802 I 0.682
ENSCSAG00000011062 Chlorocebus sabaeus ENSCSAG00000011062 I 0.682
FOXA2 Gorilla gorilla ENSGGOG00000006368 I 0.682
SMAR012068 Strigamia maritima SMAR012068 I 0.681
AAD03481 Xenopus laevis AAD03481 I 0.681
foxa4.S Xenopus laevis XB-GENE-6254437 I 0.681
L889_g23423 Steinernema feltiae L889_g23423 I 0.681
L892_g1880 Steinernema scapterisci L892_g1880 I 0.681
ENSAPLG00000011202 Anas platyrhynchos ENSAPLG00000011202 I 0.681
L893_g7176 Steinernema glaseri L893_g7176 I 0.681
ENSONIG00000008136 Oreochromis niloticus ENSONIG00000008136 I 0.680
foxa2 Takifugu rubripes ENSTRUG00000008187 I 0.680
foxa2 Tetraodon nigroviridis ENSTNIG00000016890 I 0.680
Afo_R004467 Aptenodytes forsteri Afo_R004467 I 0.679
ENSAMXG00000018279 Astyanax mexicanus ENSAMXG00000018279 I 0.678
SSTP_0000682700 Strongyloides stercoralis SSTP_0000682700 I 0.678
SPAL_0000059200 Strongyloides papillosus SPAL_0000059200 I 0.678
SVE_0245400 Strongyloides venezuelensis SVE_0245400 I 0.678
SMAR012270 Strigamia maritima SMAR012270 I 0.677
ENSGMOG00000018910 Gadus morhua ENSGMOG00000018910 I 0.677
ENSPFOG00000003245 Poecilia formosa ENSPFOG00000003245 I 0.677
PTRK_0000571700 Parastrongyloides trichosuri PTRK_0000571700 I 0.677
foxa2 Gasterosteus aculeatus ENSGACG00000006986 I 0.677
foxa2 Oryzias latipes ENSORLG00000017407 I 0.677
ENSXMAG00000016270 Xiphophorus maculatus ENSXMAG00000016270 I 0.677
CBN28470 Caenorhabditis brenneri CBN28470 I 0.676
ENSAMXG00000000305 Astyanax mexicanus ENSAMXG00000000305 I 0.676
ENSAMXG00000008595 Astyanax mexicanus ENSAMXG00000008595 I 0.676
foxa1 Gasterosteus aculeatus ENSGACG00000004306 I 0.676
foxa1 Tetraodon nigroviridis ENSTNIG00000002587 I 0.676
foxa1 Danio rerio ENSDARG00000102138 I 0.676
foxa1 Takifugu rubripes ENSTRUG00000006136 I 0.676
ENSONIG00000011782 Oreochromis niloticus ENSONIG00000011782 I 0.676
ENSXMAG00000018285 Xiphophorus maculatus ENSXMAG00000018285 I 0.676
foxa1.S Xenopus laevis XB-GENE-6256649 I 0.676
foxa1 Oryzias latipes ENSORLG00000019506 I 0.676
ENSPFOG00000009082 Poecilia formosa ENSPFOG00000009082 I 0.676
foxa3 Takifugu rubripes ENSTRUG00000016283 I 0.675
foxa3 Tetraodon nigroviridis ENSTNIG00000018991 I 0.675
ENSXMAG00000013112 Xiphophorus maculatus ENSXMAG00000013112 I 0.675
ENSPFOG00000016416 Poecilia formosa ENSPFOG00000016416 I 0.675
ENSONIG00000018714 Oreochromis niloticus ENSONIG00000018714 I 0.675
ENSGACG00000011863 Gasterosteus aculeatus ENSGACG00000011863 I 0.675
PTRK_0000571600 Parastrongyloides trichosuri PTRK_0000571600 I 0.674
SVE_0245500 Strongyloides venezuelensis SVE_0245500 I 0.674
SSTP_0000682600 Strongyloides stercoralis SSTP_0000682600 I 0.674
RSKR_0000508000 Rhabditophanes kr3021 RSKR_0000508000 I 0.674
SPAL_0000059300 Strongyloides papillosus SPAL_0000059300 I 0.674
ENSLACG00000008212 Latimeria chalumnae ENSLACG00000008212 I 0.673
Pvit_15615 Pogona vitticeps Pvit_15615 I 0.673
foxa2 Danio rerio ENSDARG00000003411 I 0.673
ENSPMAG00000004735 Petromyzon marinus ENSPMAG00000004735 I 0.672
Cmyd_10014568 Chelonia mydas Cmyd_10014568 I 0.671
ENSP00000315955-D2 Bos grunniens ENSP00000315955-D2 I 0.671
Gfo_R012942 Geospiza fortis Gfo_R012942 I 0.671
Aan_R005715 Calypte anna Aan_R005715 I 0.671
foxa1 Xenopus tropicalis XB-GENE-487352 I 0.671
Ogr19511 Ophisaurus gracilis Ogr19511 I 0.671
ENSPPYG00000005758 Pongo abelii ENSPPYG00000005758 I 0.671
ENSLOCG00000009382 Lepisosteus oculatus ENSLOCG00000009382 I 0.671
ENSLOCG00000014809 Lepisosteus oculatus ENSLOCG00000014809 I 0.671
FOXA1 Loxodonta africana ENSLAFG00000000062 I 0.671
ENSGMOG00000019127 Gadus morhua ENSGMOG00000019127 I 0.671
FOXA1 Gorilla gorilla ENSGGOG00000022617 I 0.671
ENSMEUG00000000643 Macropus eugenii ENSMEUG00000000643 I 0.671
ENSMICG00000003135 Microcebus murinus ENSMICG00000003135 I 0.671
Foxa1 Mus musculus ENSMUSG00000035451 D 0.671
ENSMPUG00000016255 Mustela putorius furo ENSMPUG00000016255 I 0.671
FOXA1 Macaca mulatta ENSMMUG00000009653 I 0.671
FOXA1 Myotis lucifugus ENSMLUG00000029779 I 0.671
foxa3 Gasterosteus aculeatus ENSGACG00000012621 I 0.671
FOXA1 Homo sapiens ENSG00000129514 D 0.671
FOXA1 Bos taurus ENSBTAG00000013888 I 0.671
ENSAMXG00000021510 Astyanax mexicanus ENSAMXG00000021510 I 0.671
ENSAMEG00000008009 Ailuropoda melanoleuca ENSAMEG00000008009 I 0.671
FOXA1 Anolis carolinensis ENSACAG00000001256 I 0.671
FOXA1 Canis familiaris ENSCAFG00000013743 I 0.671
ENSCPOG00000026606 Cavia porcellus ENSCPOG00000026606 I 0.671
FOXA1 Felis catus ENSFCAG00000028305 I 0.671
ENSFALG00000006161 Ficedula albicollis ENSFALG00000006161 I 0.671
FOXA1 Dasypus novemcinctus ENSDNOG00000032245 I 0.671
ENSCSAG00000015444 Chlorocebus sabaeus ENSCSAG00000015444 I 0.671
ENSOARG00000008192 Ovis aries ENSOARG00000008192 I 0.671
ENSMODG00000012030 Monodelphis domestica ENSMODG00000012030 I 0.671
FOXA1 Sorex araneus ENSSARG00000008208 I 0.671
Foxa1 Rattus norvegicus ENSRNOG00000009284 I 0.671
FOXA1 Otolemur garnettii ENSOGAG00000031319 I 0.671
FOXA1 Pan troglodytes ENSPTRG00000006285 I 0.671
ENSSHAG00000001593 Sarcophilus harrisii ENSSHAG00000001593 I 0.671
ENSSSCG00000001940 Sus scrofa ENSSSCG00000001940 I 0.671
ENSVPAG00000009933 Vicugna pacos ENSVPAG00000009933 I 0.671
FOXA1 Tursiops truncatus ENSTTRG00000002855 I 0.671
ENSSTOG00000023537 Ictidomys tridecemlineatus ENSSTOG00000023537 I 0.671
ENSPSIG00000011490 Pelodiscus sinensis ENSPSIG00000011490 I 0.671
FOXA1 Pteropus vampyrus ENSPVAG00000014588 I 0.671
ENSPANG00000015153 Papio anubis ENSPANG00000015153 I 0.671
foxa3 Oryzias latipes ENSORLG00000001423 I 0.671
ENSONIG00000007667 Oreochromis niloticus ENSONIG00000007667 I 0.671
CRE24249 Caenorhabditis remanei CRE24249 I 0.670
ENSLACG00000012599 Latimeria chalumnae ENSLACG00000012599 I 0.670
ENSPMAG00000005222 Petromyzon marinus ENSPMAG00000005222 I 0.668
Alligator_sinensis_CCG000874.1 Alligator sinensis Alligator_sinensis_CCG000874.1 I 0.667
ENSTRUG00000015568 Takifugu rubripes ENSTRUG00000015568 I 0.667
FOXA3 Anolis carolinensis ENSACAG00000007869 I 0.667
Cmyd_10002100 Chelonia mydas Cmyd_10002100 I 0.667
Ogr11089 Ophisaurus gracilis Ogr11089 I 0.667
Pvit_16910 Pogona vitticeps Pvit_16910 I 0.667
foxa3 Danio rerio ENSDARG00000012788 I 0.667
ENSPSIG00000006046 Pelodiscus sinensis ENSPSIG00000006046 I 0.667
CGI_10025509 Crassostrea gigas CGI_10025509 I 0.665
BGLB001562 Biomphalaria glabrata BGLB001562 I 0.665
TriadG27448 Trichoplax adhaerens TriadG27448 I 0.665
CapteG169665 Capitella teleta CapteG169665 I 0.665
LotgiG183845 Lottia gigantea LotgiG183845 I 0.665