RO3G_05383 (Rhizopus oryzae)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 RO3G_05383 T191461_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GLN3
M00048_2.00
Saccharomyces cerevisiae
NHGATAAS

STTATCDN
PBM
Badis et al.(2008)
GLN3_2032
0.818 0.714
GLN3
M01545_2.00
Saccharomyces cerevisiae
HGATARN

NYTATCD
PBM
Zhu et al.(2009)
Gln3
0.818 0.714
GLN3
M07477_2.00
Saccharomyces cerevisiae
GATWR

YWATC
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0307.1
0.818 0.714
GLN3
M08559_2.00
Saccharomyces cerevisiae
GATWR

YWATC
Misc
DeBoer et al.(2011)
YER040W_539
0.818 0.714
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RO3T_05382 GATA 130 164

Links

Other GATA family TFs
Other Rhizopus oryzae TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GLN3 Saccharomyces cerevisiae YER040W D 0.818
AMAG_16339 Allomyces macrogynus AMAG_16339 I 0.811
6181_YER040W Saccharomyces paradoxus 6181_YER040W I 0.818
6025_YER040W Saccharomyces mikatae 6025_YER040W I 0.818
YALI0_F17886g Yarrowia lipolytica YALI0_F17886g I 0.836
SU7_0865 Saccharomyces arboricola SU7_0865 I 0.818
LALA0_S01e01838g Lachancea lanzarotensis LALA0_S01e01838g I 0.820
CAGL0C02277g Candida glabrata CAGL0C02277g I 0.818
RO3G_00657 Rhizopus oryzae RO3G_00657 I 0.831
AMAG_19058 Allomyces macrogynus AMAG_19058 I 0.811
6302_YER040W Saccharomyces bayanus 6302_YER040W I 0.818