CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORUFI10G12920
(
Oryza rufipogon
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
ORUFI10G12920
T194552_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORUFI10G12920.1
GATA
69
104
CRHCGTTETPQWRHGPEGHRTLCNACSMRYRSGKLV
ORUFI10G12920.1
GATA
241
276
CAHCGTTKTPAWRLGPDSRRKLCNACGNKERKRSVV
ORUFI10G12920.1
GATA
368
388
CRHCGSTETPLWRERDGPAEA
ORUFI10G12920.1
GATA
430
465
CTHCGTTKTPAWLSGPDSRGKLCNACGKQYRKGRLV
Links
Other
GATA
family TFs
Other
Oryza rufipogon
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA10G0109200
Oryza glaberrima
ORGLA10G0109200
N
0.838
ONIVA10G11610
Oryza nivara
ONIVA10G11610
N
0.838
OMERI10G09300
Oryza meridionalis
OMERI10G09300
N
0.838
OBART10G12340
Oryza barthii
OBART10G12340
N
0.838
BGIOSGA031769
Oryza indica
BGIOSGA031769
N
0.838