ZML2 (Arabidopsis lyrata)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 scaffold_104929.1 T195125_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GATA28
M01996_2.00
Arabidopsis thaliana
NNGATNN

NNATCNN
PBM
Weirauch et al.(2014)
pTH7505
0.867 0.972
GATA28
M06883_2.00
Arabidopsis thaliana
GATGATGATGATGATGATG

CATCATCATCATCATCATC
Dap-seq
OMalley et al.(2016)
ZML2_col_a
0.867 0.972
OS06G0698900
M02015_2.00
Oryza sativa
NNNNAHBNN

NNVDTNNNN
PBM
Weirauch et al.(2014)
pTH8641
0.851 0.861
GATA24
M01941_2.00
Arabidopsis thaliana
HGATBNN

NNVATCD
PBM
Weirauch et al.(2014)
pTH7661
0.847 0.889
ZIM
M06892_2.00
Arabidopsis thaliana
AWYSRACGGYYVWGA

TCWBRRCCGTYSRWT
Dap-seq
OMalley et al.(2016)
ZIM_col_a
0.810 0.806
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_104929.1 GATA 224 261

Links

Other GATA family TFs
Other Arabidopsis lyrata TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
XBP1 Saccharomyces cerevisiae YIL101C D 0.000
TVAG_407860 Trichomonas vaginalis TVAG_407860 I 0.000
TVAG_417620 Trichomonas vaginalis TVAG_417620 I 0.000
TVAG_418370 Trichomonas vaginalis TVAG_418370 I 0.000
TVAG_422850 Trichomonas vaginalis TVAG_422850 I 0.000
TVAG_428400 Trichomonas vaginalis TVAG_428400 I 0.000
TVAG_431290 Trichomonas vaginalis TVAG_431290 I 0.000
TVAG_443860 Trichomonas vaginalis TVAG_443860 I 0.000
TVAG_446510 Trichomonas vaginalis TVAG_446510 I 0.000
TVAG_448590 Trichomonas vaginalis TVAG_448590 I 0.000
TVAG_450400 Trichomonas vaginalis TVAG_450400 I 0.000
TVAG_451310 Trichomonas vaginalis TVAG_451310 I 0.000
TVAG_464320 Trichomonas vaginalis TVAG_464320 I 0.000
TVAG_466400 Trichomonas vaginalis TVAG_466400 I 0.000
TVAG_469670 Trichomonas vaginalis TVAG_469670 I 0.000
TVAG_471660 Trichomonas vaginalis TVAG_471660 I 0.000
TVAG_407290 Trichomonas vaginalis TVAG_407290 I 0.000
TVAG_406620 Trichomonas vaginalis TVAG_406620 I 0.000
TVAG_304110 Trichomonas vaginalis TVAG_304110 I 0.000
TVAG_312030 Trichomonas vaginalis TVAG_312030 I 0.000
TVAG_315670 Trichomonas vaginalis TVAG_315670 I 0.000
TVAG_315700 Trichomonas vaginalis TVAG_315700 I 0.000
TVAG_317360 Trichomonas vaginalis TVAG_317360 I 0.000
TVAG_320670 Trichomonas vaginalis TVAG_320670 I 0.000
TVAG_321230 Trichomonas vaginalis TVAG_321230 I 0.000
TVAG_333520 Trichomonas vaginalis TVAG_333520 I 0.000
TVAG_336250 Trichomonas vaginalis TVAG_336250 I 0.000
TVAG_347110 Trichomonas vaginalis TVAG_347110 I 0.000
TVAG_356580 Trichomonas vaginalis TVAG_356580 I 0.000
TVAG_358740 Trichomonas vaginalis TVAG_358740 I 0.000
TVAG_384340 Trichomonas vaginalis TVAG_384340 I 0.000
TVAG_384980 Trichomonas vaginalis TVAG_384980 I 0.000
TVAG_398170 Trichomonas vaginalis TVAG_398170 I 0.000
TVAG_474270 Trichomonas vaginalis TVAG_474270 I 0.000
TVAG_481770 Trichomonas vaginalis TVAG_481770 I 0.000
TVAG_547380 Trichomonas vaginalis TVAG_547380 I 0.000
TVAG_551090 Trichomonas vaginalis TVAG_551090 I 0.000
TVAG_551410 Trichomonas vaginalis TVAG_551410 I 0.000
TVAG_552810 Trichomonas vaginalis TVAG_552810 I 0.000
TVAG_555690 Trichomonas vaginalis TVAG_555690 I 0.000
TVAG_556150 Trichomonas vaginalis TVAG_556150 I 0.000
TVAG_563060 Trichomonas vaginalis TVAG_563060 I 0.000
TVAG_563360 Trichomonas vaginalis TVAG_563360 I 0.000
TVAG_566490 Trichomonas vaginalis TVAG_566490 I 0.000
TVAG_568980 Trichomonas vaginalis TVAG_568980 I 0.000
TVAG_578750 Trichomonas vaginalis TVAG_578750 I 0.000
TVAG_579860 Trichomonas vaginalis TVAG_579860 I 0.000
TVAG_590210 Trichomonas vaginalis TVAG_590210 I 0.000
TVAG_595500 Trichomonas vaginalis TVAG_595500 I 0.000
TVAG_544290 Trichomonas vaginalis TVAG_544290 I 0.000
TVAG_535180 Trichomonas vaginalis TVAG_535180 I 0.000
TVAG_535080 Trichomonas vaginalis TVAG_535080 I 0.000
TVAG_484270 Trichomonas vaginalis TVAG_484270 I 0.000
TVAG_485740 Trichomonas vaginalis TVAG_485740 I 0.000
TVAG_597870 Trichomonas vaginalis TVAG_597870 I 0.000
TVAG_490690 Trichomonas vaginalis TVAG_490690 I 0.000
TVAG_492320 Trichomonas vaginalis TVAG_492320 I 0.000
TVAG_494850 Trichomonas vaginalis TVAG_494850 I 0.000
TVAG_500220 Trichomonas vaginalis TVAG_500220 I 0.000
TVAG_501520 Trichomonas vaginalis TVAG_501520 I 0.000
TVAG_511900 Trichomonas vaginalis TVAG_511900 I 0.000
TVAG_514140 Trichomonas vaginalis TVAG_514140 I 0.000
TVAG_518010 Trichomonas vaginalis TVAG_518010 I 0.000
TVAG_518770 Trichomonas vaginalis TVAG_518770 I 0.000
TVAG_525230 Trichomonas vaginalis TVAG_525230 I 0.000
TVAG_528950 Trichomonas vaginalis TVAG_528950 I 0.000
TVAG_595910 Trichomonas vaginalis TVAG_595910 I 0.000
TVAG_298530 Trichomonas vaginalis TVAG_298530 I 0.000
TVAG_008370 Trichomonas vaginalis TVAG_008370 I 0.000
TVAG_138190 Trichomonas vaginalis TVAG_138190 I 0.000
TVAG_141020 Trichomonas vaginalis TVAG_141020 I 0.000
TVAG_170760 Trichomonas vaginalis TVAG_170760 I 0.000
TVAG_170790 Trichomonas vaginalis TVAG_170790 I 0.000
TVAG_179440 Trichomonas vaginalis TVAG_179440 I 0.000
TVAG_181200 Trichomonas vaginalis TVAG_181200 I 0.000
TVAG_187200 Trichomonas vaginalis TVAG_187200 I 0.000
TVAG_194980 Trichomonas vaginalis TVAG_194980 I 0.000
TVAG_200950 Trichomonas vaginalis TVAG_200950 I 0.000
TVAG_203550 Trichomonas vaginalis TVAG_203550 I 0.000
TVAG_208090 Trichomonas vaginalis TVAG_208090 I 0.000
TVAG_208170 Trichomonas vaginalis TVAG_208170 I 0.000
TVAG_209560 Trichomonas vaginalis TVAG_209560 I 0.000
TVAG_122130 Trichomonas vaginalis TVAG_122130 I 0.000
TVAG_106110 Trichomonas vaginalis TVAG_106110 I 0.000
TVAG_017810 Trichomonas vaginalis TVAG_017810 I 0.000
TVAG_018140 Trichomonas vaginalis TVAG_018140 I 0.000
TVAG_030320 Trichomonas vaginalis TVAG_030320 I 0.000
TVAG_033530 Trichomonas vaginalis TVAG_033530 I 0.000
TVAG_034560 Trichomonas vaginalis TVAG_034560 I 0.000
TVAG_041220 Trichomonas vaginalis TVAG_041220 I 0.000
TVAG_048830 Trichomonas vaginalis TVAG_048830 I 0.000
TVAG_049600 Trichomonas vaginalis TVAG_049600 I 0.000
TVAG_050010 Trichomonas vaginalis TVAG_050010 I 0.000
TVAG_058550 Trichomonas vaginalis TVAG_058550 I 0.000
TVAG_074130 Trichomonas vaginalis TVAG_074130 I 0.000
TVAG_085400 Trichomonas vaginalis TVAG_085400 I 0.000
TVAG_105110 Trichomonas vaginalis TVAG_105110 I 0.000
TVAG_213270 Trichomonas vaginalis TVAG_213270 I 0.000
TVAG_287290 Trichomonas vaginalis TVAG_287290 I 0.000
TVAG_286860 Trichomonas vaginalis TVAG_286860 I 0.000
TVAG_243160 Trichomonas vaginalis TVAG_243160 I 0.000
TVAG_290350 Trichomonas vaginalis TVAG_290350 I 0.000
TVAG_255490 Trichomonas vaginalis TVAG_255490 I 0.000
TVAG_242410 Trichomonas vaginalis TVAG_242410 I 0.000
TVAG_258650 Trichomonas vaginalis TVAG_258650 I 0.000
TVAG_236320 Trichomonas vaginalis TVAG_236320 I 0.000
TVAG_223860 Trichomonas vaginalis TVAG_223860 I 0.000
TVAG_297830 Trichomonas vaginalis TVAG_297830 I 0.000
TVAG_223440 Trichomonas vaginalis TVAG_223440 I 0.000
TVAG_033770 Trichomonas vaginalis TVAG_033770 I 0.000
TVAG_287680 Trichomonas vaginalis TVAG_287680 I 0.000
TVAG_264480 Trichomonas vaginalis TVAG_264480 I 0.000
TVAG_281620 Trichomonas vaginalis TVAG_281620 I 0.000
TVAG_218720 Trichomonas vaginalis TVAG_218720 I 0.000
TVAG_217510 Trichomonas vaginalis TVAG_217510 I 0.000
TVAG_274390 Trichomonas vaginalis TVAG_274390 I 0.000
TVAG_488790 Trichomonas vaginalis TVAG_488790 N 0.000
TVAG_552140 Trichomonas vaginalis TVAG_552140 N 0.000
TVAG_284950 Trichomonas vaginalis TVAG_284950 N 0.000
TVAG_550490 Trichomonas vaginalis TVAG_550490 N 0.000
TVAG_520250 Trichomonas vaginalis TVAG_520250 N 0.000
TVAG_048500 Trichomonas vaginalis TVAG_048500 N 0.000
TVAG_555770 Trichomonas vaginalis TVAG_555770 N 0.000
TVAG_007350 Trichomonas vaginalis TVAG_007350 N 0.000
TVAG_300190 Trichomonas vaginalis TVAG_300190 N 0.000
TVAG_581440 Trichomonas vaginalis TVAG_581440 N 0.000
TVAG_579060 Trichomonas vaginalis TVAG_579060 N 0.000
TVAG_018710 Trichomonas vaginalis TVAG_018710 N 0.000
TVAG_313920 Trichomonas vaginalis TVAG_313920 N 0.000
TVAG_298590 Trichomonas vaginalis TVAG_298590 N 0.000
TVAG_314440 Trichomonas vaginalis TVAG_314440 N 0.000
TVAG_068520 Trichomonas vaginalis TVAG_068520 N 0.000
TVAG_544250 Trichomonas vaginalis TVAG_544250 N 0.000
TVAG_384790 Trichomonas vaginalis TVAG_384790 N 0.000
TVAG_386750 Trichomonas vaginalis TVAG_386750 N 0.000
TVAG_389220 Trichomonas vaginalis TVAG_389220 N 0.000
TVAG_187270 Trichomonas vaginalis TVAG_187270 N 0.000
TVAG_203070 Trichomonas vaginalis TVAG_203070 N 0.000
TVAG_449400 Trichomonas vaginalis TVAG_449400 N 0.000
TVAG_207810 Trichomonas vaginalis TVAG_207810 N 0.000
TVAG_410790 Trichomonas vaginalis TVAG_410790 N 0.000
TVAG_429070 Trichomonas vaginalis TVAG_429070 N 0.000
TVAG_164960 Trichomonas vaginalis TVAG_164960 N 0.000
TVAG_161450 Trichomonas vaginalis TVAG_161450 N 0.000
TVAG_262670 Trichomonas vaginalis TVAG_262670 N 0.000
TVAG_356380 Trichomonas vaginalis TVAG_356380 N 0.000
TVAG_205770 Trichomonas vaginalis TVAG_205770 N 0.000
TVAG_261360 Trichomonas vaginalis TVAG_261360 N 0.000
TVAG_125240 Trichomonas vaginalis TVAG_125240 N 0.000
TVAG_515220 Trichomonas vaginalis TVAG_515220 N 0.000
TVAG_129110 Trichomonas vaginalis TVAG_129110 N 0.000
TVAG_129120 Trichomonas vaginalis TVAG_129120 N 0.000
TVAG_132500 Trichomonas vaginalis TVAG_132500 N 0.000
TVAG_215750 Trichomonas vaginalis TVAG_215750 N 0.000