VIT_09s0054g00440 (Vitis vinifera)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 VIT_09s0054g00440 T195676_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GATA24
M01941_2.00
Arabidopsis thaliana
HGATBNN

NNVATCD
PBM
Weirauch et al.(2014)
pTH7661
0.851 0.944
GATA28
M01996_2.00
Arabidopsis thaliana
NNGATNN

NNATCNN
PBM
Weirauch et al.(2014)
pTH7505
0.851 0.889
GATA28
M06883_2.00
Arabidopsis thaliana
GATGATGATGATGATGATG

CATCATCATCATCATCATC
Dap-seq
OMalley et al.(2016)
ZML2_col_a
0.851 0.889
OS06G0698900
M02015_2.00
Oryza sativa
NNNNAHBNN

NNVDTNNNN
PBM
Weirauch et al.(2014)
pTH8641
0.851 0.861
ZIM
M06892_2.00
Arabidopsis thaliana
AWYSRACGGYYVWGA

TCWBRRCCGTYSRWT
Dap-seq
OMalley et al.(2016)
ZIM_col_a
0.815 0.861
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_09s0054g00440.t01 GATA 220 257

Links

Other GATA family TFs
Other Vitis vinifera TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000013478 Ailuropoda melanoleuca ENSAMEG00000013478 I 0.000
GB53867 Apis mellifera GB53867 I 0.000
ENSBTAP00000019345-D1 Bos grunniens ENSBTAP00000019345-D1 I 0.000
SNAI1 Bos taurus ENSBTAG00000014554 I 0.000
SNAI1 Callithrix jacchus ENSCJAG00000000518 I 0.000
SNAI1 Canis familiaris ENSCAFG00000011499 I 0.000
SNAI1 Cavia porcellus ENSCPOG00000026663 I 0.000
ENSCSAG00000015065 Chlorocebus sabaeus ENSCSAG00000015065 I 0.000
snai3 Danio rerio ENSDARG00000031243 I 0.000
snai1a Danio rerio ENSDARG00000056995 I 0.000
ENSDNOG00000024891 Dasypus novemcinctus ENSDNOG00000024891 I 0.000
SNAI1 Dasypus novemcinctus ENSDNOG00000023834 I 0.000
GM16048 Drosophila sechellia FBgn0170964 I 0.000
ENSETEG00000016371 Echinops telfairi ENSETEG00000016371 I 0.000
SNAI1 Equus caballus ENSECAG00000009787 I 0.000
SNAI1 Felis catus ENSFCAG00000010558 I 0.000
ENSGMOG00000017815 Gadus morhua ENSGMOG00000017815 I 0.000
snai1a Gasterosteus aculeatus ENSGACG00000010147 I 0.000
SNAI1 Gorilla gorilla ENSGGOG00000024422 I 0.000
SNAI1 Homo sapiens ENSG00000124216 D 0.000
ENSSTOG00000005866 Ictidomys tridecemlineatus ENSSTOG00000005866 I 0.000
SNAI1 Loxodonta africana ENSLAFG00000030265 I 0.000
ENSMMUG00000019719 Macaca mulatta ENSMMUG00000019719 I 0.000
ENSMICG00000011160 Microcebus murinus ENSMICG00000011160 I 0.000
ENSMPUG00000017558 Mustela putorius furo ENSMPUG00000017558 I 0.000
Snai1 Mus musculus ENSMUSG00000042821 D 0.000
Myotis_brandtii_SNAI1_10026057 Myotis brandtii Myotis_brandtii_SNAI1_10026057 I 0.000
Myotis_brandtii_SNAI1_10026379 Myotis brandtii Myotis_brandtii_SNAI1_10026379 I 0.000
ENSMLUG00000015053 Myotis lucifugus ENSMLUG00000015053 I 0.000
ENSNLEG00000006985 Nomascus leucogenys ENSNLEG00000006985 I 0.000
ENSONIG00000020305 Oreochromis niloticus ENSONIG00000020305 I 0.000
SNAI1 Oryctolagus cuniculus ENSOCUG00000005422 I 0.000
SNAI1 Otolemur garnettii ENSOGAG00000030111 I 0.000
ENSOARG00000013174 Ovis aries ENSOARG00000013174 I 0.000
SNAI1 Pan troglodytes ENSPTRG00000013614 I 0.000
ENSPANG00000007536 Papio anubis ENSPANG00000007536 I 0.000
ENSPFOG00000015709 Poecilia formosa ENSPFOG00000015709 I 0.000
SNAI1 Procavia capensis ENSPCAG00000011934 I 0.000
SNAI1 Pteropus vampyrus ENSPVAG00000004119 I 0.000
Snai1 Rattus norvegicus ENSRNOG00000009594 I 0.000
snai1a Takifugu rubripes ENSTRUG00000012293 I 0.000
snai3 Takifugu rubripes ENSTRUG00000002385 I 0.000
ENSTNIG00000004434 Tetraodon nigroviridis ENSTNIG00000004434 I 0.000
snai1a Tetraodon nigroviridis ENSTNIG00000007311 I 0.000
SNAI1 Tupaia belangeri ENSTBEG00000012262 I 0.000
snai3 Xenopus tropicalis XB-GENE-488030 I 0.000
ENSXMAG00000009637 Xiphophorus maculatus ENSXMAG00000009637 I 0.000