Pavir.J26059 (Panicum virgatum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Pavir.J26059 T196769_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J26059.1.p GATA 114 144
Pavir.J26059.1.p GATA 243 278

Links

Other GATA family TFs
Other Panicum virgatum TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J37525 Panicum virgatum Pavir.J37525 N 0.859
Si010130m.g Setaria italica Si010130m.g N 0.859
GRMZM2G067171 Zea mays GRMZM2G067171 N 0.854
Sb08g004340 Sorghum bicolor Sb08g004340 N 0.854
Pavir.Gb00810 Panicum virgatum Pavir.Gb00810 N 0.852
OPUNC12G04230 Oryza punctata OPUNC12G04230 N 0.828
OS12G0168800 Oryza sativa OS12G0168800 N 0.823
ORGLA12G0039500 Oryza glaberrima ORGLA12G0039500 N 0.823
OGLUM12G04960 Oryza glumaepatula OGLUM12G04960 N 0.823
ORUFI12G04780 Oryza rufipogon ORUFI12G04780 N 0.823
OMERI11G19020 Oryza meridionalis OMERI11G19020 N 0.823
ONIVA12G03860 Oryza nivara ONIVA12G03860 N 0.823
GRMZM2G118214 Zea mays GRMZM2G118214 N 0.817