Pavir.J37525 (Panicum virgatum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Pavir.J37525 T196776_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J37525.1.p GATA 153 188
Pavir.J37525.1.p GATA 283 318
Pavir.J37525.2.p GATA 153 188
Pavir.J37525.2.p GATA 283 318

Links

Other GATA family TFs
Other Panicum virgatum TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si010130m.g Setaria italica Si010130m.g N 0.867
Sb08g004340 Sorghum bicolor Sb08g004340 N 0.859
Pavir.J26059 Panicum virgatum Pavir.J26059 N 0.859
GRMZM2G067171 Zea mays GRMZM2G067171 N 0.859
Pavir.Gb00810 Panicum virgatum Pavir.Gb00810 N 0.857
OPUNC12G04230 Oryza punctata OPUNC12G04230 N 0.836
OS12G0168800 Oryza sativa OS12G0168800 N 0.830
ORGLA12G0039500 Oryza glaberrima ORGLA12G0039500 N 0.830
OGLUM12G04960 Oryza glumaepatula OGLUM12G04960 N 0.830
ORUFI12G04780 Oryza rufipogon ORUFI12G04780 N 0.830
OMERI11G19020 Oryza meridionalis OMERI11G19020 N 0.830
ONIVA12G03860 Oryza nivara ONIVA12G03860 N 0.830
GRMZM2G118214 Zea mays GRMZM2G118214 N 0.825