CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L596_g19549
(
Steinernema carpocapsae
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04516 (CP2)
IPR007604
L596_g19549
T199702_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L596_g19549.t1
Grainyhead
245
467
QVPQEMTSIIERPERTLSHRDSPVVIAKIHNRLGFQYVLEAPISTQIRKDDDRMTYVNKGQYYNVIMSYIPDHQKPLQSKTVRSTLMLAFREDKTYEKEMETWFKWHKEQQNRRQRIIDYDAKNSTGFHGQITEPALNAIEFYWDPTEGPVKLSLAVQCLSTDFSPQKGVKGWPMHLQIDTYDDENAKTPFHRGFCQIKVFCDKGAERKLRDEDKRAQKRKNQ
L596_g19549.t2
Grainyhead
245
467
QVPQEMTSIIERPERTLSHRDSPVVIAKIHNRLGFQYVLEAPISTQIRKDDDRMTYVNKGQYYNVIMSYIPDHQKPLQSKTVRSTLMLAFREDKTYEKEMETWFKWHKEQQNRRQRIIDYDAKNSTGFHGQITEPALNAIEFYWDPTEGPVKLSLAVQCLSTDFSPQKGVKGWPMHLQIDTYDDENAKTPFHRGFCQIKVFCDKGANRKMLHENRRDEKRRQT
L596_g19549.t3
Grainyhead
245
467
QVPQEMTSIIERPERTLSHRDSPVVIAKIHNRLGFQYVLEAPISTQIRKDDDRMTYVNKGQYYNVIMSYIPDHQKPLQSKTVRSTLMLAFREDKTYEKEMETWFKWHKEQQNRRQRIIDYDAKNSTGFHGQITEPALNAIEFYWDPTEGPVKLSLAVQCLSTDFSPQKGVKGWPMHLQIDTYDDENAKTPFHRGFCQIKVFCDKGAERKLRDEDKRAQKRKNQ
Links
Other
Grainyhead
family TFs
Other
Steinernema carpocapsae
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L892_g25006
Steinernema scapterisci
L892_g25006
N
0.919
L889_g11263
Steinernema feltiae
L889_g11263
N
0.887
L898_g1752
Steinernema monticolum
L898_g1752
N
0.869
L893_g6531
Steinernema glaseri
L893_g6531
N
0.834
NBR_0001111401
Nippostrongylus brasiliensis
NBR_0001111401
I
0.769