CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_11s0016g04630
(
Vitis vinifera
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
VIT_11s0016g04630
T201835_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_11s0016g04630.t01
GRAS
156
519
LVHMMMTCAESVQRGDLPLAGSLIEEMQALLTRVNTGCGIGKVARYFIDALNRRVFTPQAPCATGWSNENEILYHHFYEACPYLKFAHFTANQAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNVRFAFRGVAASRLEDVKPWMLQVSPKEAVAINSIMQLHRLLGSGPTRVSAIETVLGWIRSLNPKIVTVVEQEANHNQSEFLDRFTEALYYYSTMFDSLEACSLQPEKAVAEIYIQKEICNVLCCEGSARVERHEPLAKWRNRLGAAGFRPLNLGSNAFKQASMLLTLFSAEGYCVEEHDGCLTLGWHSRPLIAASAWQ
Links
Other
GRAS
family TFs
Other
Vitis vinifera
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa003975mg
Prunus persica
PRUPE_ppa003975mg
N
0.859
TCM_037975
Theobroma cacao
TCM_037975
N
0.854
Gorai.009G021700
Gossypium raimondii
Gorai.009G021700
N
0.846
gene30958-v1.0-hybrid
Fragaria vesca
gene30958-v1.0-hybrid
N
0.837
evm.TU.supercontig_75.88
Carica papaya
evm.TU.supercontig_75.88
N
0.834
29807.m000482
Ricinus communis
29807.m000482
N
0.834
Gorai.010G067000
Gossypium raimondii
Gorai.010G067000
N
0.832
orange1.1g009607m.g
Citrus sinensis
orange1.1g009607m.g
N
0.831
Lus10033061.g
Linum usitatissimum
Lus10033061.g
N
0.830
PK11483.1
Cannabis sativa
PK11483.1
N
0.829
Ciclev10010825m.g
Citrus clementina
Ciclev10010825m.g
N
0.829
Aquca_001_00705
Aquilegia coerulea
Aquca_001_00705
N
0.823
MDP0000825698
Malus domestica
MDP0000825698
N
0.820
Ca_24417
Cicer arietinum
Ca_24417
N
0.820
Eucgr.C04156
Eucalyptus grandis
Eucgr.C04156
N
0.815
Lus10017758.g
Linum usitatissimum
Lus10017758.g
N
0.808
Cla012500
Citrullus lanatus
Cla012500
N
0.804
Cucsa.082270
Cucumis sativus
Cucsa.082270
N
0.803
Lus10033060.g
Linum usitatissimum
Lus10033060.g
N
0.803
GLYMA04G21340
Glycine max
GLYMA04G21340
N
0.790
GLYMA06G23940
Glycine max
GLYMA06G23940
N
0.784
GLYMA10G33380
Glycine max
GLYMA10G33380
N
0.776
GLYMA20G34260
Glycine max
GLYMA20G34260
N
0.758