CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10033060.g
(
Linum usitatissimum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Lus10033060.g
T202759_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10033060
GRAS
162
336
LVHMLMTCAEYIQRGELALAGSLIQDMQGLLTRVDNGCGIGKVAGYFIDALTRRIFAPVTATVGPGSAYETEILYHHFYEACPYLKFAHFTANQAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDQLREIGLRLAELARSVNVRRSLNRP
Links
Other
GRAS
family TFs
Other
Linum usitatissimum
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.supercontig_75.88
Carica papaya
evm.TU.supercontig_75.88
N
0.821
TCM_037975
Theobroma cacao
TCM_037975
N
0.809
Gorai.009G021700
Gossypium raimondii
Gorai.009G021700
N
0.809
Lus10017758.g
Linum usitatissimum
Lus10017758.g
N
0.809
Gorai.010G067000
Gossypium raimondii
Gorai.010G067000
N
0.809
VIT_11s0016g04630
Vitis vinifera
VIT_11s0016g04630
N
0.803
Pm027468
Prunus mume
Pm027468
N
0.798
29807.m000482
Ricinus communis
29807.m000482
N
0.792
PRUPE_ppa003975mg
Prunus persica
PRUPE_ppa003975mg
N
0.792
orange1.1g009607m.g
Citrus sinensis
orange1.1g009607m.g
N
0.786
Ciclev10010825m.g
Citrus clementina
Ciclev10010825m.g
N
0.786
MDP0000662303
Malus domestica
MDP0000662303
N
0.780
gene30958-v1.0-hybrid
Fragaria vesca
gene30958-v1.0-hybrid
N
0.775
GLYMA06G23940
Glycine max
GLYMA06G23940
N
0.763
PK11483.1
Cannabis sativa
PK11483.1
N
0.763
Eucgr.C04156
Eucalyptus grandis
Eucgr.C04156
N
0.757
Cla012500
Citrullus lanatus
Cla012500
N
0.757
GLYMA04G21340
Glycine max
GLYMA04G21340
N
0.746
MDP0000825698
Malus domestica
MDP0000825698
N
0.746
GLYMA10G33380
Glycine max
GLYMA10G33380
N
0.740
Aquca_001_00705
Aquilegia coerulea
Aquca_001_00705
N
0.734
GLYMA20G34260
Glycine max
GLYMA20G34260
N
0.711