CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_08777
(
Cicer arietinum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Ca_08777
T201869_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_08777
GRAS
146
515
LVQLLIACAEAVACRDKSHASILLSELKSNALVFGSSFQRVASCFVQGLTERLTMIQPIGSVTKSMMNIMDAASEEMEEAFKLVYEICPHIQFGHFVANSIILEAFEGESFVHVVDLGMSLGLPHGHQWRGLIRSLASRSSQRVRRLRITGVGLCIARIQVIGEELSVYANNLGIHLEFSIVDKNLENLKPEDIKVNEKEVLVVNSILQLHCVVKESRGALNSVLQMIHGLSPKVLVMVEQDSGHNGPFFLGRFMESLHYYSAIFDSLDAMLPKYDTKRAKMEQFYFAEEIKNIVSCEGPLRMERHEKVDQWRRRMSRAGFQGVPIKMMSQGKEWLVKNKVCDGYTVVEEKGCLVLGWKSKPIVAASCWK
Links
Other
GRAS
family TFs
Other
Cicer arietinum
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_4g104020
Medicago truncatula
MTR_4g104020
N
0.904
GLYMA05G03020
Glycine max
GLYMA05G03020
N
0.821
GLYMA17G13680
Glycine max
GLYMA17G13680
N
0.816
POPTR_0015s10310
Populus trichocarpa
POPTR_0015s10310
N
0.808
gene22702-v1.0-hybrid
Fragaria vesca
gene22702-v1.0-hybrid
N
0.805
cassava33470.m1
Manihot esculenta
cassava33470.m1
N
0.797
TCM_014574
Theobroma cacao
TCM_014574
N
0.794
30147.m013794
Ricinus communis
30147.m013794
N
0.791
POPTR_0012s09550
Populus trichocarpa
POPTR_0012s09550
N
0.786
Pm024459
Prunus mume
Pm024459
N
0.786
PRUPE_ppa016418mg
Prunus persica
PRUPE_ppa016418mg
N
0.780
Ciclev10019777m.g
Citrus clementina
Ciclev10019777m.g
N
0.777
orange1.1g040125m.g
Citrus sinensis
orange1.1g040125m.g
N
0.777
Gorai.006G270800
Gossypium raimondii
Gorai.006G270800
N
0.761
VIT_17s0000g10300
Vitis vinifera
VIT_17s0000g10300
N
0.758
mgf020930m
Mimulus guttatus
mgf020930m
N
0.755
Solyc03g110950.1
Solanum lycopersicum
Solyc03g110950.1
N
0.739
PGSC0003DMG400015255
Solanum tuberosum
PGSC0003DMG400015255
N
0.736
orange1.1g037028m.g
Citrus sinensis
orange1.1g037028m.g
N
0.731
Lus10017930.g
Linum usitatissimum
Lus10017930.g
N
0.717
Eucgr.H04688
Eucalyptus grandis
Eucgr.H04688
N
0.717
Ciclev10031305m.g
Citrus clementina
Ciclev10031305m.g
N
0.712
Cla019540
Citrullus lanatus
Cla019540
N
0.708
TCM_010708
Theobroma cacao
TCM_010708
N
0.706