CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene29558-v1.0-hybrid
(
Fragaria vesca
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
gene29558-v1.0-hybrid
T202581_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna29558.1-v1.0-hybrid
GRAS
182
551
FIEELIRAADCFDSDELNLAQVILDRLNQRQRLISPNSKPVGKPLQRAAVYFKDALQSLLNTSTGSSPVRNLSSWSEIVQTIRAYKGFSGISPIPMFSHFTTNQALLEALNGSSFIHVIDFDIGLGGQYASLMKELAEKADVSRTNPPVLRITAVVPEEYAVESRLVRENLSQFAQELRIRFQIDFLLVRTFEILSFKAVKFMDGEKTAVLLSPYIMRRLGAADNVGAFLGDMRRVSPSVVVFVDGEGMAESGATSFRRNFVSGLEFFSIMMESLDAAVPGGEMVRKIEAFLLRPKIEAAVEAAGRRVPPWREVFHGAGMRAVELSQFADFQAQCLLGKVQVRGFHVAKRQAELVLCWHDRALVATSAWR
Links
Other
GRAS
family TFs
Other
Fragaria vesca
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000139971
Malus domestica
MDP0000139971
N
0.838
PRUPE_ppa003675mg
Prunus persica
PRUPE_ppa003675mg
N
0.824
MDP0000319851
Malus domestica
MDP0000319851
N
0.753
chr4.CM0165.310.nd
Lotus japonicus
chr4.CM0165.310.nd
N
0.745
Ca_16043
Cicer arietinum
Ca_16043
N
0.716
MTR_8g077940
Medicago truncatula
MTR_8g077940
N
0.714
GLYMA02G06530
Glycine max
GLYMA02G06530
N
0.709
GLYMA16G25570
Glycine max
GLYMA16G25570
N
0.706
GLYMA01G38360
Glycine max
GLYMA01G38360
N
0.700