MDP0000319342 (Malus domestica)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 MDP0000319342 T202871_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000319342 GRAS 116 495

Links

Other GRAS family TFs
Other Malus domestica TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm004863 Prunus mume Pm004863 N 0.940
PRUPE_ppa018977mg Prunus persica PRUPE_ppa018977mg N 0.935
gene11137-v1.0-hybrid Fragaria vesca gene11137-v1.0-hybrid N 0.918
MDP0000884524 Malus domestica MDP0000884524 N 0.872
orange1.1g011012m.g Citrus sinensis orange1.1g011012m.g N 0.837
cassava44367.m1 Manihot esculenta cassava44367.m1 N 0.834
TCM_035069 Theobroma cacao TCM_035069 N 0.831
Ciclev10000940m.g Citrus clementina Ciclev10000940m.g N 0.828
POPTR_0005s15900 Populus trichocarpa POPTR_0005s15900 N 0.826
Gorai.010G048800 Gossypium raimondii Gorai.010G048800 N 0.809
VIT_18s0001g03310 Vitis vinifera VIT_18s0001g03310 N 0.809
SapurV1A.0105s0110 Salix purpurea SapurV1A.0105s0110 N 0.807
Gorai.009G244200 Gossypium raimondii Gorai.009G244200 N 0.807
29908.m006159 Ricinus communis 29908.m006159 N 0.807
POPTR_0002s08660 Populus trichocarpa POPTR_0002s08660 N 0.801
evm.TU.supercontig_36.32 Carica papaya evm.TU.supercontig_36.32 N 0.798
Eucgr.L03490 Eucalyptus grandis Eucgr.L03490 N 0.798
cassava32027.m1 Manihot esculenta cassava32027.m1 N 0.787
Aquca_014_00175 Aquilegia coerulea Aquca_014_00175 N 0.782
SapurV1A.0010s0900 Salix purpurea SapurV1A.0010s0900 N 0.779
PGSC0003DMG400012071 Solanum tuberosum PGSC0003DMG400012071 N 0.777
Lus10008316.g Linum usitatissimum Lus10008316.g N 0.777
Ca_26279 Cicer arietinum Ca_26279 N 0.774
Solyc11g013150.1 Solanum lycopersicum Solyc11g013150.1 N 0.771
MTR_3g072710 Medicago truncatula MTR_3g072710 N 0.763
GLYMA06G11610 Glycine max GLYMA06G11610 N 0.757
GLYMA04G43090 Glycine max GLYMA04G43090 N 0.752
Lus10028056.g Linum usitatissimum Lus10028056.g N 0.744
LjT26J05.10.nc Lotus japonicus LjT26J05.10.nc N 0.738
LjT15C06.70.nc Lotus japonicus LjT15C06.70.nc N 0.733