Gtf2ird1 (Rattus norvegicus)
GTF2I-like

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02946 (GTF2I) IPR004212 ENSRNOG00000001478 T203497_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
may act as a muscle specific transcription factor; human homolog may be associated with the Williams-Beuren microdeletion syndrome [RGD, Feb 2006]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GTF2IRD1
M10618_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BEN_01
0.809 0.809
GTF2IRD1
M10619_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BEN_02
0.971 0.971
GTF2IRD1
M10620_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GTF2IRD1_01
0.971 0.971
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000002010 GTF2I-like 128 202
ENSRNOP00000002010 GTF2I-like 351 425
ENSRNOP00000002010 GTF2I-like 565 639
ENSRNOP00000002010 GTF2I-like 690 764
ENSRNOP00000002010 GTF2I-like 787 861
ENSRNOP00000069637 GTF2I-like 128 202
ENSRNOP00000069637 GTF2I-like 351 425
ENSRNOP00000069637 GTF2I-like 565 639
ENSRNOP00000069637 GTF2I-like 690 764
ENSRNOP00000069637 GTF2I-like 814 888
ENSRNOP00000069637 GTF2I-like 917 991
ENSRNOP00000075217 GTF2I-like 128 202
ENSRNOP00000075217 GTF2I-like 351 425
ENSRNOP00000075217 GTF2I-like 565 639
ENSRNOP00000075217 GTF2I-like 690 764
ENSRNOP00000075217 GTF2I-like 787 861

Links

Other GTF2I-like family TFs
Other Rattus norvegicus TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R007261 Calypte anna Aan_R007261 I 0.901
Afo_R005311 Aptenodytes forsteri Afo_R005311 I 0.896
Alligator_sinensis_CCG003099.1 Alligator sinensis Alligator_sinensis_CCG003099.1 I 0.896
B7ZQJ9 Xenopus laevis B7ZQJ9 I 0.803
Brh_R010572 Buceros rhinoceros Brh_R010572 I 0.896
Cmyd_10014806 Chelonia mydas Cmyd_10014806 I 0.875
ENSAMEG00000015311 Ailuropoda melanoleuca ENSAMEG00000015311 I 0.965
ENSAMXG00000007482 Astyanax mexicanus ENSAMXG00000007482 I 0.792
ENSAPLG00000006811 Anas platyrhynchos ENSAPLG00000006811 I 0.899
GTF2IRD1 Bos taurus ENSBTAG00000006212 I 0.965
GTF2IRD1 Canis familiaris ENSCAFG00000011763 I 0.965
GTF2IRD1 Cavia porcellus ENSCPOG00000004421 I 0.952
gtf2ird1 Danio rerio ENSDARG00000022203 I 0.763
GTF2IRD1 Dasypus novemcinctus ENSDNOG00000024296 I 0.960
GTF2IRD1 Equus caballus ENSECAG00000019745 I 0.963
ENSFALG00000007085 Ficedula albicollis ENSFALG00000007085 N 0.806
GTF2IRD1 Felis catus ENSFCAG00000006551 I 0.965
GTF2IRD1 Homo sapiens ENSG00000006704 D 0.971
gtf2ird1 Gasterosteus aculeatus ENSGACG00000020844 I 0.760
GTF2IRD1 Gallus gallus ENSGALG00000001263 I 0.861
ENSGMOG00000013638 Gadus morhua ENSGMOG00000013638 I 0.747
ENSLACG00000018407 Latimeria chalumnae ENSLACG00000018407 I 0.816
ENSLOCG00000002184 Lepisosteus oculatus ENSLOCG00000002184 I 0.781
ENSMEUG00000012139 Macropus eugenii ENSMEUG00000012139 I 0.920
GTF2IRD1 Meleagris gallopavo ENSMGAG00000016801 I 0.715
GTF2IRD1 Myotis lucifugus ENSMLUG00000001668 I 0.968
GTF2IRD1 Macaca mulatta ENSMMUG00000018842 I 0.971
ENSMPUG00000016153 Mustela putorius furo ENSMPUG00000016153 I 0.805
Gtf2ird1 Mus musculus ENSMUSG00000023079 I 0.997
GTF2IRD1 Ornithorhynchus anatinus ENSOANG00000006511 N 0.817
ENSOARG00000011517 Ovis aries ENSOARG00000011517 I 0.965
GTF2IRD1 Oryctolagus cuniculus ENSOCUG00000026916 I 0.965
GTF2IRD1 Otolemur garnettii ENSOGAG00000013029 I 0.765
gtf2ird1 Oryzias latipes ENSORLG00000015316 I 0.765
ENSP00000397566 Macaca fascicularis ENSP00000397566 I 0.755
ENSPFOG00000001233 Poecilia formosa ENSPFOG00000001233 I 0.781
ENSPPYG00000017485 Pongo abelii ENSPPYG00000017485 I 0.971
ENSPSIG00000012562 Pelodiscus sinensis ENSPSIG00000012562 I 0.901
GTF2IRD1 Pan troglodytes ENSPTRG00000019292 I 0.971
LOC100912262 Rattus norvegicus ENSRNOG00000050193 I 1.000
GTF2IRD1 Sus scrofa ENSSSCG00000007720 I 0.963
ENSSTOG00000014343 Ictidomys tridecemlineatus ENSSTOG00000014343 I 0.965
GTF2IRD1 Tupaia belangeri ENSTBEG00000014017 I 0.771
GTF2IRD1 Taeniopygia guttata ENSTGUG00000003638 I 0.893
gtf2ird1 Tetraodon nigroviridis ENSTNIG00000004695 I 0.749
gtf2ird1 Takifugu rubripes ENSTRUG00000010068 I 0.799
ENSXMAG00000015294 Xiphophorus maculatus ENSXMAG00000015294 I 0.781
Gfo_R013537 Geospiza fortis Gfo_R013537 I 0.893
Myotis_brandtii_GTF2IRD1_10014286 Myotis brandtii Myotis_brandtii_GTF2IRD1_10014286 I 0.968
Pvit_17519 Pogona vitticeps Pvit_17519 I 0.720
Tal_R007678 Tyto alba Tal_R007678 I 0.749
gtf2ird1 Xenopus tropicalis XB-GENE-5857402 I 0.806
gtf2ird1.S Xenopus laevis XB-GENE-5857419 I 0.803
yakG035477 Bos grunniens yakG035477 N 0.727