Gtf2ird1 (Rattus norvegicus)
GTF2I-like

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02946 (GTF2I) IPR004212 ENSRNOG00000001478 T203497_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to act upstream of or within transition between slow and fast fiber. Predicted to be located in cytosol and nucleoplasm. Predicted to be active in nucleus. Orthologous to human GTF2IRD1 (GTF2I repeat domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GTF2IRD1
M10618_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BEN_01 		0.971 0.971
GTF2IRD1
M10619_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BEN_02 		0.971 0.971
GTF2IRD1
M10620_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GTF2IRD1_01 		0.971 0.971
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000002010 GTF2I-like 128 202
ENSRNOP00000002010 GTF2I-like 351 425
ENSRNOP00000002010 GTF2I-like 565 639
ENSRNOP00000002010 GTF2I-like 690 764
ENSRNOP00000002010 GTF2I-like 787 861
ENSRNOP00000069637 GTF2I-like 128 202
ENSRNOP00000069637 GTF2I-like 351 425
ENSRNOP00000069637 GTF2I-like 565 639
ENSRNOP00000069637 GTF2I-like 690 764
ENSRNOP00000069637 GTF2I-like 814 888
ENSRNOP00000069637 GTF2I-like 917 991
ENSRNOP00000075217 GTF2I-like 128 202
ENSRNOP00000075217 GTF2I-like 351 425
ENSRNOP00000075217 GTF2I-like 565 639
ENSRNOP00000075217 GTF2I-like 690 764
ENSRNOP00000075217 GTF2I-like 787 861

Links

Other GTF2I-like family TFs
Other Rattus norvegicus TFs

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55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action