Aqu1.227912 (Amphimedon queenslandica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Aqu1.227912 T204438_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Pknox1
M00399_2.00 		Mus musculus
HGACRNNN
NNNYGTCD		 PBM
Berger et al.(2008)
Pknox1_2364 		0.600 0.509
Pknox2
M00468_2.00 		Mus musculus
NNNGACRNNN
NNNYGTCNNN		 PBM
Berger et al.(2008)
Pknox2_3077 		0.600 0.509
PKNOX1
M03178_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
PKNOX1_1 		0.600 0.509
PKNOX2
M03195_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
PKNOX2_1 		0.600 0.509
Pknox2
M03270_2.00 		Mus musculus
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
Pknox2_1 		0.600 0.509
PKNOX1
M05206_2.00 		Homo sapiens
TGACASSTGTCA
TGACASSTGTCA		 SELEX
Yin et al.(2017)
PKNOX1_eDBD_HT-SELEX 		0.600 0.509
PKNOX1
M05208_2.00 		Homo sapiens
TGACAGCTGTCA
TGACAGCTGTCA		 SELEX
Yin et al.(2017)
PKNOX1_FL_HT-SELEX 		0.600 0.509
PKNOX2
M05246_2.00 		Homo sapiens
TGACABVTGTCA
TGACABVTGTCA		 SELEX
Yin et al.(2017)
PKNOX2_eDBD_HT-SELEX 		0.600 0.509
PKNOX1
M09150_2.00 		Homo sapiens
TGABTGRCRGV
BCYGYCAVTCA		 Misc
Kulakovskiy et al.(2013)
PKNX1_HUMAN.H11MO.0.B 		0.600 0.509
Pknox1
M09175_2.00 		Mus musculus
TGABTGRCRGV
BCYGYCAVTCA		 Misc
Kulakovskiy et al.(2013)
PKNX1_MOUSE.H11MO.0.A 		0.600 0.509
PKNOX1
M10712_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PREP1_Q3 		0.600 0.509
PKNOX1
M05207_2.00 		Homo sapiens
YGWCASSTGWCR
YGWCASSTGWCR		 SELEX
Yin et al.(2017)
PKNOX1_eDBD_Methyl-HT-SELEX 		0.600 0.509
PKNOX1
M05209_2.00 		Homo sapiens
TGACABVTGTCA
TGACABVTGTCA		 SELEX
Yin et al.(2017)
PKNOX1_FL_Methyl-HT-SELEX 		0.600 0.509
PKNOX2
M05247_2.00 		Homo sapiens
TGACASSTGTCA
TGACASSTGTCA		 SELEX
Yin et al.(2017)
PKNOX2_eDBD_Methyl-HT-SELEX 		0.600 0.509
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PAC:15726440 Homeodomain 147 204

Links

Other Homeodomain family TFs
Other Amphimedon queenslandica TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CHLREDRAFT_206298 Chlamydomonas reinhardtii CHLREDRAFT_206298 N 0.632
CapteG181110 Capitella teleta CapteG181110 N 0.616
nRc.2.0.1.g06302 Romanomermis culicivorax nRc.2.0.1.g06302 I 0.608
ENSCSAVG00000009146 Ciona savignyi ENSCSAVG00000009146 I 0.605
prep Ciona intestinalis ENSCING00000019064 I 0.605
ENSPSIG00000009954 Pelodiscus sinensis ENSPSIG00000009954 I 0.600
PKNOX2 Pteropus vampyrus ENSPVAG00000000626 I 0.600
PKNOX1 Pan troglodytes ENSPTRG00000013950 I 0.600
PKNOX2 Pan troglodytes ENSPTRG00000004440 I 0.600
ENSPSIG00000017680 Pelodiscus sinensis ENSPSIG00000017680 I 0.600
Pknox1 Rattus norvegicus ENSRNOG00000001184 I 0.600
ENSSHAG00000016900 Sarcophilus harrisii ENSSHAG00000016900 I 0.600
ENSSTOG00000000447 Ictidomys tridecemlineatus ENSSTOG00000000447 I 0.600
ENSSTOG00000004207 Ictidomys tridecemlineatus ENSSTOG00000004207 I 0.600
PKNOX1 Tupaia belangeri ENSTBEG00000013997 I 0.600
ENSSSCG00000026311 Sus scrofa ENSSSCG00000026311 I 0.600
PKNOX2 Sus scrofa ENSSSCG00000015211 I 0.600
ENSSHAG00000016846 Sarcophilus harrisii ENSSHAG00000016846 I 0.600
ENSPPYG00000011461 Pongo abelii ENSPPYG00000011461 I 0.600
Pknox2 Rattus norvegicus ENSRNOG00000028856 I 0.600
ENSPFOG00000018596 Poecilia formosa ENSPFOG00000018596 I 0.600
ENSONIG00000015777 Oreochromis niloticus ENSONIG00000015777 I 0.600
ENSONIG00000017418 Oreochromis niloticus ENSONIG00000017418 I 0.600
PKNOX1 Otolemur garnettii ENSOGAG00000003664 I 0.600
PKNOX2 Otolemur garnettii ENSOGAG00000002815 I 0.600
PKNOX2 Oryctolagus cuniculus ENSOCUG00000014633 I 0.600
PKNOX1 Oryctolagus cuniculus ENSOCUG00000017650 I 0.600
PKNOX1 Ochotona princeps ENSOPRG00000002486 I 0.600
PKNOX2 Ochotona princeps ENSOPRG00000009322 I 0.600
ENSPFOG00000017346 Poecilia formosa ENSPFOG00000017346 I 0.600
PKNOX2 Taeniopygia guttata ENSTGUG00000000744 I 0.600
PKNOX2 Procavia capensis ENSPCAG00000000856 I 0.600
ENSPANG00000023248 Papio anubis ENSPANG00000023248 I 0.600
pknox1.2 Oryzias latipes ENSORLG00000020833 I 0.600
ENSPANG00000014340 Papio anubis ENSPANG00000014340 I 0.600
ENSPPYG00000004030 Pongo abelii ENSPPYG00000004030 I 0.600
PKNOX2 Tursiops truncatus ENSTTRG00000000189 I 0.600
Gfo_R004177 Geospiza fortis Gfo_R004177 I 0.600
Gfo_R010090 Geospiza fortis Gfo_R010090 I 0.600
Myotis_brandtii_PKNOX2_10018964 Myotis brandtii Myotis_brandtii_PKNOX2_10018964 I 0.600
ENSP00000298282 Macaca fascicularis ENSP00000298282 I 0.600
ENSP00000291547 Macaca fascicularis ENSP00000291547 I 0.600
ENSBTAP00000000057-D1 Bos grunniens ENSBTAP00000000057-D1 I 0.600
ENSBTAP00000018809-D1 Bos grunniens ENSBTAP00000018809-D1 I 0.600
Pvit_02826 Pogona vitticeps Pvit_02826 I 0.600
Pvit_15181 Pogona vitticeps Pvit_15181 I 0.600
pknox2 Xenopus tropicalis XB-GENE-853128 I 0.600
csin111072 Clonorchis sinensis csin111072 I 0.600
pknox1.L Xenopus laevis XB-GENE-6254732 I 0.600
SMU15028100 Schmidtea mediterranea SMU15028100 I 0.600
CLEC012261 Cimex lectularius CLEC012261 I 0.600
LDEC008003 Leptinotarsa decemlineata LDEC008003 I 0.600
Cmyd_10015138 Chelonia mydas Cmyd_10015138 I 0.600
Brh_R010360 Buceros rhinoceros Brh_R010360 I 0.600
ENSXMAG00000007416 Xiphophorus maculatus ENSXMAG00000007416 I 0.600
L798_02881 Zootermopsis nevadensis L798_02881 I 0.600
ENSXMAG00000006176 Xiphophorus maculatus ENSXMAG00000006176 I 0.600
PKNOX1 Tursiops truncatus ENSTTRG00000009930 I 0.600
pknox2 Takifugu rubripes ENSTRUG00000003012 I 0.600
ENSOARG00000011381 Ovis aries ENSOARG00000011381 I 0.600
PHUM569520 Pediculus humanus PHUM569520 I 0.600
RPRC000231 Rhodnius prolixus RPRC000231 I 0.600
Afo_R001341 Aptenodytes forsteri Afo_R001341 I 0.600
Afo_R004937 Aptenodytes forsteri Afo_R004937 I 0.600
Aan_R007171 Calypte anna Aan_R007171 I 0.600
TC006040 Tribolium castaneum TC006040 I 0.600
SMAR003960 Strigamia maritima SMAR003960 I 0.600
Smp_154790 Schistosoma mansoni Smp_154790 I 0.600
PKNOX1 Taeniopygia guttata ENSTGUG00000005745 I 0.600
ENSNLEG00000014675 Nomascus leucogenys ENSNLEG00000014675 I 0.600
ENSCSAG00000002312 Chlorocebus sabaeus ENSCSAG00000002312 I 0.600
ENSCSAG00000008042 Chlorocebus sabaeus ENSCSAG00000008042 I 0.600
pknox1.1 Danio rerio ENSDARG00000018765 I 0.600
ENSCPOG00000004883 Cavia porcellus ENSCPOG00000004883 I 0.600
ENSCPOG00000003157 Cavia porcellus ENSCPOG00000003157 I 0.600
PKNOX2 Callithrix jacchus ENSCJAG00000008279 I 0.600
PKNOX1 Callithrix jacchus ENSCJAG00000015798 I 0.600
pknox1.2 Danio rerio ENSDARG00000036542 I 0.600
pknox2 Danio rerio ENSDARG00000055349 I 0.600
PKNOX1 Echinops telfairi ENSETEG00000002863 I 0.600
ENSFALG00000001975 Ficedula albicollis ENSFALG00000001975 I 0.600
PKNOX2 Equus caballus ENSECAG00000018771 I 0.600
PKNOX1 Equus caballus ENSECAG00000010284 I 0.600
PKNOX2 Dasypus novemcinctus ENSDNOG00000006362 I 0.600
PKNOX1 Dasypus novemcinctus ENSDNOG00000008009 I 0.600
PKNOX1 Choloepus hoffmanni ENSCHOG00000006135 I 0.600
PKNOX2 Canis familiaris ENSCAFG00000010924 I 0.600
ENSAMEG00000000930 Ailuropoda melanoleuca ENSAMEG00000000930 I 0.600
ENSAMEG00000001778 Ailuropoda melanoleuca ENSAMEG00000001778 I 0.600
PKNOX1 Anolis carolinensis ENSACAG00000002626 I 0.600
PKNOX2 Anolis carolinensis ENSACAG00000000635 I 0.600
CapteG221385 Capitella teleta CapteG221385 I 0.600
CGI_10011944 Crassostrea gigas CGI_10011944 I 0.600
ENSAMXG00000002998 Astyanax mexicanus ENSAMXG00000002998 I 0.600
ENSAMXG00000008744 Astyanax mexicanus ENSAMXG00000008744 I 0.600
PKNOX1 Bos taurus ENSBTAG00000014153 I 0.600
PKNOX1 Canis familiaris ENSCAFG00000010518 I 0.600
PKNOX2 Bos taurus ENSBTAG00000000052 I 0.600
ENSAPLG00000013813 Anas platyrhynchos ENSAPLG00000013813 I 0.600
ENSAMXG00000012410 Astyanax mexicanus ENSAMXG00000012410 I 0.600
ENSAPLG00000009259 Anas platyrhynchos ENSAPLG00000009259 I 0.600
ENSFALG00000005397 Ficedula albicollis ENSFALG00000005397 I 0.600
PKNOX1 Felis catus ENSFCAG00000003968 I 0.600
PKNOX1 Myotis lucifugus ENSMLUG00000014821 I 0.600
PKNOX2 Macaca mulatta ENSMMUG00000008053 I 0.600
PKNOX1 Macaca mulatta ENSMMUG00000009288 I 0.600
PKNOX2 Microcebus murinus ENSMICG00000002993 I 0.600
ENSMICG00000001112 Microcebus murinus ENSMICG00000001112 I 0.600
PKNOX2 Meleagris gallopavo ENSMGAG00000000677 I 0.600
PKNOX1 Meleagris gallopavo ENSMGAG00000014582 I 0.600
PKNOX2 Monodelphis domestica ENSMODG00000004022 I 0.600
PKNOX1 Monodelphis domestica ENSMODG00000021026 I 0.600
ENSNLEG00000007448 Nomascus leucogenys ENSNLEG00000007448 I 0.600
PKNOX1 Ornithorhynchus anatinus ENSOANG00000006461 I 0.600
Pknox2 Mus musculus ENSMUSG00000035934 D 0.600
Pknox1 Mus musculus ENSMUSG00000006705 D 0.600
ENSMPUG00000006449 Mustela putorius furo ENSMPUG00000006449 I 0.600
ENSMPUG00000009673 Mustela putorius furo ENSMPUG00000009673 I 0.600
ENSLOCG00000005322 Lepisosteus oculatus ENSLOCG00000005322 I 0.600
ENSLOCG00000003857 Lepisosteus oculatus ENSLOCG00000003857 I 0.600
pknox2 Gasterosteus aculeatus ENSGACG00000020127 I 0.600
ENSGALG00000000316 Gallus gallus ENSGALG00000000316 I 0.600
pknox1.2 Gasterosteus aculeatus ENSGACG00000001456 I 0.600
PKNOX2 Homo sapiens ENSG00000165495 D 0.600
PKNOX2 Felis catus ENSFCAG00000015096 I 0.600
PKNOX1 Homo sapiens ENSG00000160199 D 0.600
PKNOX1 Gallus gallus ENSGALG00000016191 I 0.600
PKNOX1 Gorilla gorilla ENSGGOG00000013783 I 0.600
PKNOX2 Loxodonta africana ENSLAFG00000010875 I 0.600
PKNOX1 Loxodonta africana ENSLAFG00000011377 I 0.600
ENSLACG00000015873 Latimeria chalumnae ENSLACG00000015873 I 0.600
ENSLACG00000008017 Latimeria chalumnae ENSLACG00000008017 I 0.600
ENSGMOG00000001437 Gadus morhua ENSGMOG00000001437 I 0.600
ENSGMOG00000018171 Gadus morhua ENSGMOG00000018171 I 0.600
ENSOARG00000011069 Ovis aries ENSOARG00000011069 I 0.600