CGI_10013213 (Crassostrea gigas)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 CGI_10013213 T205833_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Esx1
M00424_2.00
Mus musculus
NYTAATWR

YWATTARN
PBM
Berger et al.(2008)
Esx1_3124
0.660 0.456
ceh-54
M02188_2.00
Caenorhabditis elegans
HTAATTRVN

NBYAATTAD
PBM
Weirauch et al.(2014)
pTH5643
0.643 0.491
CaO19.4000
M02061_2.00
Candida albicans
NNDWATWRN

NYWATWHNN
PBM
Weirauch et al.(2014)
pTH5822
0.605 0.333
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC26783 Homeodomain 11 67

Links

Other Homeodomain family TFs
Other Crassostrea gigas TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CaO19.11483 Candida albicans CaO19.11483 I 0.605
CaO19.4000 Candida albicans CaO19.4000 D 0.605
CBG14858 Caenorhabditis briggsae CBG14858 I 0.631
CBN18011 Caenorhabditis brenneri CBN18011 I 0.644
CD36_54680 Candida dubliniensis CD36_54680 I 0.605
ceh-54 Caenorhabditis elegans WBGene00020485 D 0.643
CJA11788 Caenorhabditis japonica CJA11788 I 0.631
CORT_0B02840 Candida orthopsilosis CORT_0B02840 I 0.626
CRE00191 Caenorhabditis remanei CRE00191 I 0.665
CTRG_06116 Candida tropicalis CTRG_06116 I 0.637
EDEG_02526 Edhazardia aedis EDEG_02526 I 0.665
ENSCAFG00000023214 Canis familiaris ENSCAFG00000023214 I 0.665
ENSCHOG00000002622 Choloepus hoffmanni ENSCHOG00000002622 I 0.642
ENSSTOG00000023781 Ictidomys tridecemlineatus ENSSTOG00000023781 I 0.631
ENSTBEG00000007985 Tupaia belangeri ENSTBEG00000007985 I 0.631
Esx1 Mus musculus ENSMUSG00000023443 D 0.660
Esx1 Rattus norvegicus ENSRNOG00000048011 I 0.664
G210_1625 Candida maltosa G210_1625 I 0.637
GLOINDRAFT_4254 Rhizophagus irregularis GLOINDRAFT_4254 I 0.609
H311_01337 Anncaliia algerae H311_01337 I 0.666
H311_02306 Anncaliia algerae H311_02306 I 0.666
H311_03552 Anncaliia algerae H311_03552 I 0.621
LELG_04000 Lodderomyces elongisporus LELG_04000 I 0.604
ML021120a Mnemiopsis leidyi ML021120a I 0.628
Sakowv30037698m.g Saccoglossus kowalevskii Sakowv30037698m.g I 0.653
SEBOX Pteropus vampyrus ENSPVAG00000002882 I 0.631
SEBOX Cavia porcellus ENSCPOG00000005498 I 0.631
TELCIR_13423 Teladorsagia circumcincta TELCIR_13423 I 0.639
TriadG60748 Trichoplax adhaerens TriadG60748 I 0.658