CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Duxbl1
(
Mus musculus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSMUSG00000048502
T212526_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Duxbl1
M00502_2.00
Mus musculus
NWGATKRNNN
NNNYMATCWN
PBM
Berger et al.(2008)
Duxl_1286
(Direct)
(Direct)
Duxbl1
M02099_2.00
Mus musculus
NTGATTRNN
NNYAATCAN
PBM
Weirauch et al.(2014)
pTH6453
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.599
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00502_2.00
Homeodomain
14
70
RRRRIILTQSQKDTLRVWFEKNPNPDLATRGHLAKELGISESQIMTWFQKHRKIRKQ
M00502_2.00
Homeodomain
94
148
RRSRTHFTKFQTDILIEAFEKNRFPGIVTREKLAQQTGIPESRIHIWFQNRRARH
M02099_2.00
Homeodomain
1
55
RRSRTHFTKFQTDILIEAFEKNRFPGIVTREKLAQQTGIPESRIHIWFQNRRARH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000056056
Homeodomain
15
71
RRRRIILTQSQKDTLRVWFEKNPNPDLATRGHLAKELGISESQIMTWFQKHRKIRKQ
ENSMUSP00000056056
Homeodomain
95
149
RRSRTHFTKFQTDILIEAFEKNRFPGIVTREKLAQQTGIPESRIHIWFQNRRARH
ENSMUSP00000133570
Homeodomain
15
71
RRRRIILTQSQKDTLRVWFEKNPNPDLATRGHLAKELGISESQIMTWFQKHRKIRKQ
ENSMUSP00000133570
Homeodomain
95
140
RRSRTHFTKFQTDILIEAFEKNRFPGIVTREKLAQQTGIPESRIHV
ENSMUSP00000134001
Homeodomain
15
71
RRRRIILTQSQKDTLRVWFEKNPNPDLATRGHLAKELGISESQIMTWFQKHRKIRKQ
ENSMUSP00000134483
Homeodomain
15
71
RRRRIILTQSQKDTLRVWFEKNPNPDLATRGHLAKELGISESQIMTWFQKHRKIRKQ
ENSMUSP00000134483
Homeodomain
95
149
RRSRTHFTKFQTDILIEAFEKNRFPGIVTREKLAQQTGIPESRIHIWFQNRRARH
Links
Other
Homeodomain
family TFs
Other
Mus musculus
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy