SIX6 (Tursiops truncatus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSTTRG00000003743 T216929_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SIX6
M00326_2.00
Homo sapiens
NNDATMB

VKATHNN
PBM
Barrera et al.(2016)
SIX6_REF
0.867 1.000
Six6
M00169_2.00
Mus musculus
NNAYMNN

NNKRTNN
PBM
Badis et al.(2009)
Six6_2267
0.867 1.000
Six6
M00412_2.00
Mus musculus
NNNTGATAYCN

NGRTATCANNN
PBM
Berger et al.(2008)
Six6_2267
0.867 1.000
SIX6
M05357_2.00
Homo sapiens
NNYGATASVB

VBSTATCRNN
SELEX
Yin et al.(2017)
SIX6_eDBD_HT-SELEX
0.867 1.000
SIX6
M05358_2.00
Homo sapiens
VBVYAYCRNN

NNYGRTRBVB
SELEX
Yin et al.(2017)
SIX6_eDBD_Methyl-HT-SELEX
0.867 1.000
Six3
M00483_2.00
Mus musculus
NNNAYMN

NKRTNNN
PBM
Berger et al.(2008)
Six3_1732
0.865 0.982
SIX3
M05159_2.00
Homo sapiens
NNYGATABBN

NVVTATCRNN
SELEX
Yin et al.(2017)
SIX3_eDBD_HT-SELEX
0.865 0.982
SIX3
M10698_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SIX3_Q6
0.865 0.982
SIX6
M00325_2.00
Homo sapiens
NNNDATMB

VKATHNNN
PBM
Barrera et al.(2016)
SIX6_H141N
0.865 0.982
SIX3
M05160_2.00
Homo sapiens
NNYGATABVB

VBVTATCRNN
SELEX
Yin et al.(2017)
SIX3_eDBD_Methyl-HT-SELEX
0.865 0.982
six3
M02102_2.00
Oryzias latipes
NNDAYMBNNN

NNNVKRTHNN
PBM
Weirauch et al.(2014)
pTH5928
0.865 0.947
Optix
M02124_2.00
Drosophila melanogaster
NNNNNDATMN

NKATHNNNNN
PBM
Weirauch et al.(2014)
pTH5437
0.865 0.930
Optix
M03850_2.00
Drosophila melanogaster
TAATYTAATTA

TAATTARATTA
SELEX
Nitta et al.(2015)
Optix_1
0.865 0.930
Optix
M06526_2.00
Drosophila melanogaster
TGATA

TATCA
B1H
Mathelier et al.(2014)
MA0199.1
0.865 0.930
Optix
M06327_2.00
Drosophila melanogaster
HHVTGATA

TATCABDD
B1H
Zhu et al.(2011)
Optix_Cell_FBgn0025360
0.865 0.930
Optix
M06328_2.00
Drosophila melanogaster
NNNTGATA

TATCANNN
B1H
Zhu et al.(2011)
Optix_SOLEXA_FBgn0025360
0.865 0.930
SIX6
M00327_2.00
Homo sapiens
NHDAYMBNN

NNVKRTHDN
PBM
Barrera et al.(2016)
SIX6_T165A
0.860 0.982
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000003516 Homeodomain 187 243

Links

Other Homeodomain family TFs
Other Tursiops truncatus TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Sohlh2 Mus musculus ENSMUSG00000027794 D 0.000
Sohlh2 Rattus norvegicus ENSRNOG00000038091 D 0.000
SOHLH2 Homo sapiens ENSG00000120669 D 0.000
ENSAMEG00000004619 Ailuropoda melanoleuca ENSAMEG00000004619 I 0.000
ENSOGAG00000001168 Otolemur garnettii ENSOGAG00000001168 I 0.000
ENSOPRG00000004777 Ochotona princeps ENSOPRG00000004777 I 0.000
ENSPPYG00000005276 Pongo abelii ENSPPYG00000005276 I 0.000
ENSPTRG00000005779 Pan troglodytes ENSPTRG00000005779 I 0.000
ENSPVAG00000000423 Pteropus vampyrus ENSPVAG00000000423 I 0.000
ENSSARG00000003728 Sorex araneus ENSSARG00000003728 I 0.000
ENSSHAG00000013234 Sarcophilus harrisii ENSSHAG00000013234 I 0.000
ENSSSCG00000026164 Sus scrofa ENSSSCG00000026164 I 0.000
ENSSTOG00000012257 Ictidomys tridecemlineatus ENSSTOG00000012257 I 0.000
ENSTBEG00000014863 Tupaia belangeri ENSTBEG00000014863 I 0.000
ENSTSYG00000004449 Tarsius syrichta ENSTSYG00000004449 I 0.000
ENSTTRG00000010489 Tursiops truncatus ENSTTRG00000010489 I 0.000
ENSMMUP00000001562 Macaca fascicularis ENSMMUP00000001562 I 0.000
ENSOARG00000010479 Ovis aries ENSOARG00000010479 I 0.000
ENSNLEG00000001499 Nomascus leucogenys ENSNLEG00000001499 I 0.000
ENSBTAG00000018955 Bos taurus ENSBTAG00000018955 I 0.000
ENSCAFG00000006206 Canis familiaris ENSCAFG00000006206 I 0.000
ENSCJAG00000018188 Callithrix jacchus ENSCJAG00000018188 I 0.000
ENSCPOG00000012403 Cavia porcellus ENSCPOG00000012403 I 0.000
ENSCSAG00000017881 Chlorocebus sabaeus ENSCSAG00000017881 I 0.000
ENSECAG00000000201 Equus caballus ENSECAG00000000201 I 0.000
ENSFCAG00000004161 Felis catus ENSFCAG00000004161 I 0.000
CCDC169-SOHLH2 Homo sapiens ENSG00000250709 I 0.000
ENSGGOG00000002130 Gorilla gorilla ENSGGOG00000002130 I 0.000
ENSMEUG00000002333 Macropus eugenii ENSMEUG00000002333 I 0.000
ENSMICG00000002484 Microcebus murinus ENSMICG00000002484 I 0.000
ENSMMUG00000001172 Macaca mulatta ENSMMUG00000001172 I 0.000
ENSMODG00000009965 Monodelphis domestica ENSMODG00000009965 I 0.000
ENSMPUG00000001856 Mustela putorius furo ENSMPUG00000001856 I 0.000
ENSP00000393788-D1 Bos grunniens ENSP00000393788-D1 I 0.000