CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HelroG92823
(
Helobdella robusta
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
HelroG92823
T219546_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NOTO
M03241_2.00
Homo sapiens
NNTAATKWRN
NYWMATTANN
SELEX
Jolma et al.(2013)
NOTO_1
0.618
0.463
NOTO
M05390_2.00
Homo sapiens
BTAATKRV
BYMATTAV
SELEX
Yin et al.(2017)
NOTO_eDBD_HT-SELEX
0.618
0.463
NOTO
M05391_2.00
Homo sapiens
BTMATKRV
BYMATKAV
SELEX
Yin et al.(2017)
NOTO_eDBD_Methyl-HT-SELEX
0.618
0.463
Noto
M02101_2.00
Mus musculus
NNHHATDDNN
NNHHATDDNN
PBM
Weirauch et al.(2014)
pTH6268
0.617
0.444
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HelroP92823
Homeodomain
1
54
RTAHSPGQIEKLENEFAKNNFLDASRRDRISAETGLDINQVRYWFQYRRVKERK
Links
Other
Homeodomain
family TFs
Other
Helobdella robusta
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy