CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NEMVEDRAFT_v1g92347
(
Nematostella vectensis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
NEMVEDRAFT_v1g92347
T221096_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Duxbl1
M02099_2.00
Mus musculus
NTGATTRNN
NNYAATCAN
PBM
Weirauch et al.(2014)
pTH6453
0.619
0.642
mixl1.S
M02233_2.00
Xenopus laevis
NHTAATTAANN
NNTTAATTADN
PBM
Weirauch et al.(2014)
pTH6163
0.602
0.604
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDO45305
Homeodomain
15
67
RRQRTFFSKEQTVILEEAFQYERFPGIQIREKLARELDIDESRIQVWFQNRRS
Links
Other
Homeodomain
family TFs
Other
Nematostella vectensis
TFs
69 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy