ONIVA04G25940 (Oryza nivara)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ONIVA04G25940 T221655_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WUS
M06905_2.00
Arabidopsis thaliana
TRAWTGAWTGA

TCAWTCAWTYA
Dap-seq
OMalley et al.(2016)
WUS1_col_a
0.751 0.649
WUS
M06906_2.00
Arabidopsis thaliana
TGAWTGAWTGW

WCAWTCAWTCA
Dap-seq
OMalley et al.(2016)
WUS1_colamp_a
0.751 0.649
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA04G25940.1 Homeodomain 89 150

Links

Other Homeodomain family TFs
Other Oryza nivara TFs

448 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
10921_YIL056W Saccharomyces mikatae 10921_YIL056W I 0.000
11035_YIL056W Saccharomyces paradoxus 11035_YIL056W I 0.000
11559_YIL056W Saccharomyces bayanus 11559_YIL056W I 0.000
6292_YER064C Saccharomyces paradoxus 6292_YER064C I 0.000
6651_YER064C Saccharomyces mikatae 6651_YER064C I 0.000
7027_YER064C Saccharomyces bayanus 7027_YER064C I 0.000
AACERI_AaceriADL067C Saccharomycetaceae sp ashbya aceri AACERI_AaceriADL067C I 0.000
AGOS_ADL067C Ashbya gossypii AGOS_ADL067C I 0.000
CAGL0J03014g Candida glabrata CAGL0J03014g I 0.000
Ecym_4329 Eremothecium cymbalariae Ecym_4329 I 0.000
KAFR_0I01770 Kazachstania africana KAFR_0I01770 I 0.000
KAFR_0L00930 Kazachstania africana KAFR_0L00930 I 0.000
KLLA0_C08151g Kluyveromyces lactis KLLA0_C08151g I 0.000
KLTH0A04444g Kluyveromyces thermotolerans KLTH0A04444g I 0.000
KLTH0A04444g Lachancea thermotolerans KLTH0A04444g I 0.000
KNAG_0L01530 Kazachstania naganishii KNAG_0L01530 I 0.000
Kpol_1066p52 Vanderwaltozyma polyspora Kpol_1066p52 I 0.000
Kwal_5842 Kluyveromyces waltii Kwal_5842 I 0.000
LALA0_S01e02388g Lachancea lanzarotensis LALA0_S01e02388g I 0.000
NCAS_0A13540 Naumovozyma castellii NCAS_0A13540 I 0.000
NCAS_0E03320 Naumovozyma castellii NCAS_0E03320 I 0.000
NDAI_0A02490 Naumovozyma dairenensis NDAI_0A02490 I 0.000
SAKL0F08734g Lachancea kluyveri SAKL0F08734g I 0.000
Scas_Contig701.7 Saccharomyces castellii Scas_Contig701.7 I 0.000
Scas_Contig704.29 Saccharomyces castellii Scas_Contig704.29 I 0.000
SKUD_176205 Saccharomyces kudriavzevii SKUD_176205 I 0.000
SU7_1620 Saccharomyces arboricola SU7_1620 I 0.000
TBLA_0C04650 Tetrapisispora blattae TBLA_0C04650 I 0.000
TDEL_0H01980 Torulaspora delbrueckii TDEL_0H01980 I 0.000
TPHA_0J00900 Tetrapisispora phaffii TPHA_0J00900 I 0.000
VHR2 Saccharomyces cerevisiae YER064C D 0.000
VHR1 Saccharomyces cerevisiae YIL056W D 0.000
ZBAI_00133 Zygosaccharomyces bailii ZBAI_00133 I 0.000
ZBAI_05302 Zygosaccharomyces bailii ZBAI_05302 I 0.000
ZYRO0C08250g Zygosaccharomyces rouxii ZYRO0C08250g I 0.000