POPTR_0006s26790 (Populus trichocarpa)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 POPTR_0006s26790 T222520_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0006s26790.1 Homeodomain 267 320

Links

Other Homeodomain family TFs
Other Populus trichocarpa TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0043s0520 Salix purpurea SapurV1A.0043s0520 N 0.714
chr1.CM0442.170.nd Lotus japonicus chr1.CM0442.170.nd N 0.671
GLYMA06G07330 Glycine max GLYMA06G07330 N 0.655
GLYMA04G07230 Glycine max GLYMA04G07230 N 0.655
mgf000632m Mimulus guttatus mgf000632m N 0.653
MTR_3g107530 Medicago truncatula MTR_3g107530 N 0.634
Pavir.Da00552 Panicum virgatum Pavir.Da00552 N 0.633
Pavir.Db01233 Panicum virgatum Pavir.Db01233 N 0.633
Sb10g023400 Sorghum bicolor Sb10g023400 N 0.633
GRMZM2G163641 Zea mays GRMZM2G163641 N 0.625
Ciclev10010768m.g Citrus clementina Ciclev10010768m.g N 0.622
orange1.1g040593m.g Citrus sinensis orange1.1g040593m.g N 0.622
29848.m004652 Ricinus communis 29848.m004652 N 0.616
Pm004594 Prunus mume Pm004594 N 0.612
PRUPE_ppa007560mg Prunus persica PRUPE_ppa007560mg N 0.612
PK00680.1 Cannabis sativa PK00680.1 N 0.610
OCP3 Arabidopsis lyrata fgenesh2_kg.6__1093__AT5G11270.1 N 0.607
OCP3 Arabidopsis thaliana AT5G11270 N 0.607
Cagra.7526s0026 Capsella grandiflora Cagra.7526s0026 N 0.607
Carubv10002492m.g Capsella rubella Carubv10002492m.g N 0.607
OCP3 Vitis vinifera VIT_04s0008g05190 N 0.605
TCM_038389 Theobroma cacao TCM_038389 N 0.605