pha-2 (Caenorhabditis elegans)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 WBGene00004011 T224638_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pha-2
M02184_2.00		 Caenorhabditis elegans
NNNATNDNNN
NNNHNATNNN		 PBM
Weirauch et al.(2014)
pTH6423		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HHEX
M06541_2.00 		Drosophila melanogaster
WYBAATWA
TWATTVRW		 B1H
Mathelier et al.(2014)
MA0183.1 		0.826 0.719
HHEX
M06358_2.00 		Drosophila melanogaster
WYBAATWA
TWATTVRW		 B1H
Zhu et al.(2011)
CG7056_Cell_FBgn0038852 		0.826 0.719
HHEX
M06359_2.00 		Drosophila melanogaster
NYBAATWR
YWATTVRN		 B1H
Zhu et al.(2011)
CG7056_SOLEXA_FBgn0038852 		0.826 0.719
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02184_2.00 Homeodomain 1 57

DNA Binding Domains

Protein ID Domain From To Sequence
M6.3 Homeodomain 77 133

Links

Other Homeodomain family TFs
Other Caenorhabditis elegans TFs

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156 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action