fgeneshPB_pg.4__239 (Phycomyces blakesleeanus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 fgeneshPB_pg.4__239 T227590_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pal-1
M02183_2.00 		Caenorhabditis elegans
GYAATWAA
TTWATTRC		 PBM
Weirauch et al.(2014)
pTH6016 		0.617 0.351
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgeneshPB_pg.4__239 Homeodomain 8 64

Links

Other Homeodomain family TFs
Other Phycomyces blakesleeanus TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSMODG00000025439 Monodelphis domestica ENSMODG00000025439 I 0.638
EFV58119 Trichinella spiralis EFV58119 I 0.635
CJA02391 Caenorhabditis japonica CJA02391 I 0.627
SMUV_0000190101 Syphacia muris SMUV_0000190101 I 0.622
pal-1 Caenorhabditis elegans WBGene00003912 D 0.617
CRE20227 Caenorhabditis remanei CRE20227 I 0.617
CBN10543 Caenorhabditis brenneri CBN10543 I 0.617
HCOI01745700 Haemonchus contortus HCOI01745700 I 0.615
SSTP_0000576200 Strongyloides stercoralis SSTP_0000576200 I 0.614
SPAL_0001492700 Strongyloides papillosus SPAL_0001492700 I 0.614
SVE_0397300 Strongyloides venezuelensis SVE_0397300 I 0.614
Bm2663 Brugia malayi Bm2663 I 0.613
CBG17980 Caenorhabditis briggsae CBG17980 I 0.613
ASU_04180 Ascaris suum ASU_04180 I 0.613
Aqu1.228528 Amphimedon queenslandica Aqu1.228528 N 0.610
PTRK_0001336600 Parastrongyloides trichosuri PTRK_0001336600 I 0.605
RSKR_0001046900 Rhabditophanes kr3021 RSKR_0001046900 I 0.605
HelroG165623 Helobdella robusta HelroG165623 I 0.600