CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.26.106.1
(
Phycomyces blakesleeanus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
gw1.26.106.1
T227619_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CNG03450
M02066_2.00
Cryptococcus neoformans
NTTAATWDN
NHWATTAAN
PBM
Weirauch et al.(2014)
pTH5724
0.623
0.536
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.26.106.1
Homeodomain
1
56
KVKRKRASPSQLSVLNRVFNQTYFPSTELRIELGKQLGMSPRTVQIWFQNKRQSAR
Links
Other
Homeodomain
family TFs
Other
Phycomyces blakesleeanus
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gw1.6.914.1
Mucor circinelloides
gw1.6.914.1
I
0.812
GLOINDRAFT_346743
Rhizophagus irregularis
GLOINDRAFT_346743
I
0.803
RO3G_01863
Rhizopus oryzae
RO3G_01863
I
0.789
RO3G_11070
Rhizopus oryzae
RO3G_11070
N
0.777
AGABI2DRAFT_192433
Agaricus bisporus
AGABI2DRAFT_192433
N
0.769
PILCRDRAFT_101484
Piloderma croceum
PILCRDRAFT_101484
N
0.769
PLEOSDRAFT_1112690
Pleurotus ostreatus
PLEOSDRAFT_1112690
N
0.769
M378DRAFT_12738
Amanita muscaria
M378DRAFT_12738
N
0.757
K443DRAFT_105165
Laccaria amethystina
K443DRAFT_105165
I
0.746
EuGene3000454
Heterobasidion annosum
EuGene3000454
N
0.741
HETIRDRAFT_169178
Heterobasidion irregulare
HETIRDRAFT_169178
N
0.741
gw1.10.371.1
Mucor circinelloides
gw1.10.371.1
I
0.738
K443DRAFT_82097
Laccaria amethystina
K443DRAFT_82097
N
0.738
GALMADRAFT_540101
Galerina marginata
GALMADRAFT_540101
N
0.738
LACBIDRAFT_324166
Laccaria bicolor
LACBIDRAFT_324166
N
0.738
M413DRAFT_24511
Hebeloma cylindrosporum
M413DRAFT_24511
N
0.737
PISMIDRAFT_217828
Pisolithus microcarpus
PISMIDRAFT_217828
N
0.737
CY34DRAFT_611334
Suillus luteus
CY34DRAFT_611334
N
0.737
CC1G_01991
Coprinopsis cinerea
CC1G_01991
N
0.737
RO3G_04480
Rhizopus oryzae
RO3G_04480
I
0.737
PAXRUDRAFT_823153
Paxillus rubicundulus
PAXRUDRAFT_823153
N
0.737
SPPG_06166
Spizellomyces punctatus
SPPG_06166
I
0.731
gw1.16.189.1
Phycomyces blakesleeanus
gw1.16.189.1
I
0.731
RO3G_14851
Rhizopus oryzae
RO3G_14851
I
0.725
SPPG_03931
Spizellomyces punctatus
SPPG_03931
I
0.724
LACBIDRAFT_297628
Laccaria bicolor
LACBIDRAFT_297628
N
0.722
RO3G_16317
Rhizopus oryzae
RO3G_16317
I
0.714
SCHCODRAFT_257652
Schizophyllum commune
SCHCODRAFT_257652
I
0.713
Moror_6850
Moniliophthora roreri
Moror_6850
N
0.692
BN946_scf184983.g13
Trametes cinnabarina
BN946_scf184983.g13
I
0.683
PHACADRAFT_258345
Phanerochaete carnosa
PHACADRAFT_258345
I
0.683
PHLGIDRAFT_184498
Phlebiopsis gigantea
PHLGIDRAFT_184498
I
0.683
FOMPIDRAFT_1031831
Fomitopsis pinicola
FOMPIDRAFT_1031831
I
0.681
FIBRA_03525
Fibroporia radiculosa
FIBRA_03525
I
0.681
GLOTRDRAFT_127900
Gloeophyllum trabeum
GLOTRDRAFT_127900
I
0.680
GLOTRDRAFT_134845
Gloeophyllum trabeum
GLOTRDRAFT_134845
N
0.668
J056_002014
Wallemia ichthyophaga
J056_002014
N
0.649
WALSEDRAFT_62198
Wallemia sebi
WALSEDRAFT_62198
N
0.643
EFA86584.1
Polysphondylium pallidum
EFA86584.1
I
0.628
JAAARDRAFT_44019
Jaapia argillacea
JAAARDRAFT_44019
N
0.626
CNG03450
Cryptococcus neoformans
CNG03450
D
0.623
L804_03528
Cryptococcus gattii
L804_03528
I
0.623
GLOINDRAFT_21145
Rhizophagus irregularis
GLOINDRAFT_21145
I
0.621
HETIRDRAFT_431289
Heterobasidion irregulare
HETIRDRAFT_431289
N
0.616
SEPMUDRAFT_122411
Sphaerulina musiva
SEPMUDRAFT_122411
I
0.611
BAUCODRAFT_120297
Baudoinia compniacensis
BAUCODRAFT_120297
I
0.611
BOTBODRAFT_56815
Botryobasidium botryosum
BOTBODRAFT_56815
N
0.607
warA
Dictyostelium discoideum
DDB_G0291075
I
0.606
estExt_fgeneshDP_pg.C_350041
Dictyostelium purpureum
estExt_fgeneshDP_pg.C_350041
I
0.606
FOMPIDRAFT_1128018
Fomitopsis pinicola
FOMPIDRAFT_1128018
I
0.605
PV05_02773
Exophiala xenobiotica
PV05_02773
I
0.602
PV11_06012
Exophiala sideris
PV11_06012
I
0.602
CY34DRAFT_810493
Suillus luteus
CY34DRAFT_810493
N
0.599