Cagra.2552s0003 (Capsella grandiflora)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Cagra.2552s0003 T228235_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK25011.1
M01253_2.00
Cannabis sativa
NNWYRMDBNN

NNVHKYRWNN
PBM
Lambert et al.(2019)
pTH11258
0.679 0.825
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.2552s0003.1.p Homeodomain 20 76
Cagra.2552s0003.2.p Homeodomain 20 76

Links

Other Homeodomain family TFs
Other Capsella grandiflora TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PDK_20s1363101g001 Phoenix dactylifera PDK_20s1363101g001 N 0.000