|
HHAL007396-PA
(Halyomorpha halys)
Homeodomain
|
TF Information |
Pfam ID |
Interpro ID |
Gene ID |
CIS-BP ID |
Sequence source |
PF00046 (Homeobox) |
IPR001356 |
HHAL007396-PA |
T229854_2.00 |
Misc (2018-Jan-19) |
NCBI Gene Info:This gene encodes a tumor suppressor protein containing transcriptional activation, DNA binding, and oligomerization domains. The encoded protein responds to diverse cellular stresses to regulate expression of target genes, thereby inducing cell cycle arrest, apoptosis, senescence, DNA repair, or changes in metabolism. Mutations in this gene are associated with a variety of human cancers, including hereditary cancers such as Li-Fraumeni syndrome. Alternative splicing of this gene and the use of alternate promoters result in multiple transcript variants and isoforms. Additional isoforms have also been shown to result from the use of alternate translation initiation codons from identical transcript variants (PMIDs: 12032546, 20937277). [provided by RefSeq, Dec 2016] |
Directly determined binding motifs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
No direct experiments |
|
|
|
|
|
Motifs from related TFs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
CG11085
M03857_2.00 |
Drosophila melanogaster |
BTAAWYGN |
NCRWTTAV |
SELEX
Nitta et al.(2015)
CG11085_1
|
0.684
|
0.909
|
CG11085
M03858_2.00 |
Drosophila melanogaster |
NTAAWCGN |
NCGWTTAN |
SELEX
Nitta et al.(2015)
CG11085_2
|
0.684
|
0.909
|
CG11085
M06532_2.00 |
Drosophila melanogaster |
TTAATDG |
CHATTAA |
B1H
Mathelier et al.(2014)
MA0171.1
|
0.684
|
0.909
|
CG11085
M06339_2.00 |
Drosophila melanogaster |
NTTAATDGV |
BCHATTAAN |
B1H
Zhu et al.(2011)
CG11085_Cell_FBgn0030408
|
0.684
|
0.909
|
CG11085
M06340_2.00 |
Drosophila melanogaster |
NHTAAWBRNN |
NNYVWTTADN |
B1H
Zhu et al.(2011)
CG11085_SOLEXA_FBgn0030408
|
0.684
|
0.909
|
Gbx2
M00462_2.00 |
Mus musculus |
NNDAHNN |
NNDTHNN |
PBM
Berger et al.(2008)
Gbx2_3110
|
0.641
|
0.618
|
Gbx1
M00525_2.00 |
Mus musculus |
NNTAATNR |
YNATTANN |
PBM
Berger et al.(2008)
Gbx1_2883
|
0.641
|
0.618
|
GBX1
M03193_2.00 |
Homo sapiens |
NBTAATTRSB |
VSYAATTAVN |
SELEX
Jolma et al.(2013)
GBX1_1
|
0.641
|
0.618
|
GBX2
M03201_2.00 |
Homo sapiens |
NNTAATTRNN |
NNYAATTANN |
SELEX
Jolma et al.(2013)
GBX2_1
|
0.641
|
0.618
|
GBX2
M03202_2.00 |
Homo sapiens |
TAATTRVBCAATWA |
TWATTGVBYAATTA |
SELEX
Jolma et al.(2013)
GBX2_2
|
0.641
|
0.618
|
GBX2
M03203_2.00 |
Homo sapiens |
NNTAATTRNN |
NNYAATTANN |
SELEX
Jolma et al.(2013)
GBX2_3
|
0.641
|
0.618
|
Gbx1
M03286_2.00 |
Mus musculus |
NNTAATTRNN |
NNYAATTANN |
SELEX
Jolma et al.(2013)
Gbx1_1
|
0.641
|
0.618
|
Gbx2
M03268_2.00 |
Mus musculus |
NNTAATTRNN |
NNYAATTANN |
SELEX
Jolma et al.(2013)
Gbx2_1
|
0.641
|
0.618
|
GBX2
M05265_2.00 |
Homo sapiens |
NTAATTRN |
NYAATTAN |
SELEX
Yin et al.(2017)
GBX2_eDBD_HT-SELEX
|
0.641
|
0.618
|
GBX2
M05268_2.00 |
Homo sapiens |
NTAATTRV |
BYAATTAN |
SELEX
Yin et al.(2017)
GBX2_FL_HT-SELEX
|
0.641
|
0.618
|
GBX2
M05266_2.00 |
Homo sapiens |
HTAAYGAB |
VTCRTTAD |
SELEX
Yin et al.(2017)
GBX2_eDBD_Methyl-HT-SELEX_1
|
0.641
|
0.618
|
GBX2
M05267_2.00 |
Homo sapiens |
NTAATTRN |
NYAATTAN |
SELEX
Yin et al.(2017)
GBX2_eDBD_Methyl-HT-SELEX_2
|
0.641
|
0.618
|
GBX2
M05269_2.00 |
Homo sapiens |
NTAATTRN |
NYAATTAN |
SELEX
Yin et al.(2017)
GBX2_FL_Methyl-HT-SELEX_1
|
0.641
|
0.618
|
GBX2
M05270_2.00 |
Homo sapiens |
NTAAYGAB |
VTCRTTAN |
SELEX
Yin et al.(2017)
GBX2_FL_Methyl-HT-SELEX_2
|
0.641
|
0.618
|
unpg
M03836_2.00 |
Drosophila melanogaster |
SSTAATYRVN |
NBYRATTASS |
SELEX
Nitta et al.(2015)
unpg_1
|
0.625
|
0.600
|
unpg
M06517_2.00 |
Drosophila melanogaster |
BTAATTR |
YAATTAV |
B1H
Mathelier et al.(2014)
MA0251.1
|
0.625
|
0.600
|
unpg
M06311_2.00 |
Drosophila melanogaster |
NBTAATTR |
YAATTAVN |
B1H
Zhu et al.(2011)
Unpg_Cell_FBgn0015561
|
0.625
|
0.600
|
unpg
M06312_2.00 |
Drosophila melanogaster |
HTAATTR |
YAATTAD |
B1H
Zhu et al.(2011)
Unpg_SOLEXA_FBgn0015561
|
0.625
|
0.600
|
Nkx1-2
M00503_2.00 |
Mus musculus |
NNTAAWNDN |
NHNWTTANN |
PBM
Berger et al.(2008)
Nkx1-2_3214
|
0.622
|
0.582
|
Nkx1-1
M00442_2.00 |
Mus musculus |
NNTAATNDNN |
NNHNATTANN |
PBM
Berger et al.(2008)
Nkx1-1_3856
|
0.621
|
0.564
|
slou
M00557_2.00 |
Drosophila melanogaster |
NNTAATDRN |
NYHATTANN |
PBM
Busser et al.(2012a)
Slou
|
0.621
|
0.564
|
slou
M03798_2.00 |
Drosophila melanogaster |
VBTAATTRSB |
VSYAATTAVB |
SELEX
Nitta et al.(2015)
slou_1
|
0.621
|
0.564
|
slou
M06494_2.00 |
Drosophila melanogaster |
YTAATKR |
YMATTAR |
B1H
Mathelier et al.(2014)
MA0245.1
|
0.621
|
0.564
|
slou
M06262_2.00 |
Drosophila melanogaster |
BYTAATKR |
YMATTARV |
B1H
Zhu et al.(2011)
Slou_Cell_FBgn0002941
|
0.621
|
0.564
|
slou
M06263_2.00 |
Drosophila melanogaster |
HTAATKR |
YMATTAD |
B1H
Zhu et al.(2011)
Slou_SOLEXA_FBgn0002941
|
0.621
|
0.564
|
exex
M03871_2.00 |
Drosophila melanogaster |
NNNNYAATTNNYDN |
NHRNNAATTRNNNN |
SELEX
Nitta et al.(2015)
exex_1
|
0.621
|
0.582
|
exex
M06544_2.00 |
Drosophila melanogaster |
BTAATTA |
TAATTAV |
B1H
Mathelier et al.(2014)
MA0224.1
|
0.621
|
0.582
|
exex
M06364_2.00 |
Drosophila melanogaster |
TAATTAV |
BTAATTA |
B1H
Zhu et al.(2011)
Exex_Cell_FBgn0041156
|
0.621
|
0.582
|
exex
M06365_2.00 |
Drosophila melanogaster |
TAATBR |
YVATTA |
B1H
Zhu et al.(2011)
Exex_SOLEXA_FBgn0041156
|
0.621
|
0.582
|
Mnx1
M00388_2.00 |
Mus musculus |
NTAATBDNNN |
NNNHVATTAN |
PBM
Berger et al.(2008)
Hlxb9_3422
|
0.621
|
0.564
|
MNX1
M03143_2.00 |
Homo sapiens |
NHTAATTRNH |
DNYAATTADN |
SELEX
Jolma et al.(2013)
MNX1_1
|
0.621
|
0.564
|
MNX1
M05126_2.00 |
Homo sapiens |
NTAATTRN |
NYAATTAN |
SELEX
Yin et al.(2017)
MNX1_eDBD_HT-SELEX
|
0.621
|
0.564
|
MNX1
M05127_2.00 |
Homo sapiens |
HTAAYGHB |
VDCRTTAD |
SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_1
|
0.621
|
0.564
|
MNX1
M05128_2.00 |
Homo sapiens |
NTAATTRN |
NYAATTAN |
SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_2
|
0.621
|
0.564
|
Barhl2
M00460_2.00 |
Mus musculus |
NTAAWNRNN |
NNYNWTTAN |
PBM
Berger et al.(2008)
Barhl2_3868
|
0.619
|
0.655
|
BARHL2
M03157_2.00 |
Homo sapiens |
NNTAAWYGNN |
NNCRWTTANN |
SELEX
Jolma et al.(2013)
BARHL2_1
|
0.619
|
0.655
|
BARHL2
M03158_2.00 |
Homo sapiens |
NNTAAWBGNN |
NNCVWTTANN |
SELEX
Jolma et al.(2013)
BARHL2_2
|
0.619
|
0.655
|
BARHL2
M03159_2.00 |
Homo sapiens |
TAAWYGNNNNTAAWYR |
YRWTTANNNNCRWTTA |
SELEX
Jolma et al.(2013)
BARHL2_3
|
0.619
|
0.655
|
BARHL2
M03160_2.00 |
Homo sapiens |
NNTAAWYGNH |
DNCRWTTANN |
SELEX
Jolma et al.(2013)
BARHL2_4
|
0.619
|
0.655
|
BARHL2
M03161_2.00 |
Homo sapiens |
NNTAAWYGNN |
NNCRWTTANN |
SELEX
Jolma et al.(2013)
BARHL2_5
|
0.619
|
0.655
|
BARHL2
M03162_2.00 |
Homo sapiens |
TAAWYGNYNHTAAWYG |
CRWTTADNRNCRWTTA |
SELEX
Jolma et al.(2013)
BARHL2_6
|
0.619
|
0.655
|
BARHL2
M05164_2.00 |
Homo sapiens |
HTAAAYGNY |
RNCRTTTAD |
SELEX
Yin et al.(2017)
BARHL2_eDBD_HT-SELEX_1
|
0.619
|
0.655
|
BARHL2
M05165_2.00 |
Homo sapiens |
NTAAWTGNB |
VNCAWTTAN |
SELEX
Yin et al.(2017)
BARHL2_eDBD_HT-SELEX_2
|
0.619
|
0.655
|
BARHL2
M05167_2.00 |
Homo sapiens |
NTAAWYGN |
NCRWTTAN |
SELEX
Yin et al.(2017)
BARHL2_FL_HT-SELEX_1
|
0.619
|
0.655
|
BARHL2
M05168_2.00 |
Homo sapiens |
NTAAWYGN |
NCRWTTAN |
SELEX
Yin et al.(2017)
BARHL2_FL_HT-SELEX_2
|
0.619
|
0.655
|
BARHL2
M05166_2.00 |
Homo sapiens |
NTAAWTGNB |
VNCAWTTAN |
SELEX
Yin et al.(2017)
BARHL2_eDBD_Methyl-HT-SELEX
|
0.619
|
0.655
|
BARHL2
M05169_2.00 |
Homo sapiens |
NTAAWTGN |
NCAWTTAN |
SELEX
Yin et al.(2017)
BARHL2_FL_Methyl-HT-SELEX
|
0.619
|
0.655
|
ENSTNIG00000006040
M02106_2.00 |
Tetraodon nigroviridis |
NNNBTAAWHRBNN |
NNVYDWTTAVNNN |
PBM
Weirauch et al.(2014)
pTH6503
|
0.617
|
0.618
|
HOXA2
M02083_2.00 |
Homo sapiens |
NNNDHHNNN |
NNNDDHNNN |
PBM
Weirauch et al.(2014)
pTH5887
|
0.616
|
0.491
|
Hoxa2
M00403_2.00 |
Mus musculus |
NTAATKRNN |
NNYMATTAN |
PBM
Berger et al.(2008)
Hoxa2_3079
|
0.616
|
0.491
|
HOXA2
M03097_2.00 |
Homo sapiens |
NBTAATKRNN |
NNYMATTAVN |
SELEX
Jolma et al.(2013)
HOXA2_1
|
0.616
|
0.491
|
HOXB2
M03213_2.00 |
Homo sapiens |
NNTAATKRNN |
NNYMATTANN |
SELEX
Jolma et al.(2013)
HOXB2_1
|
0.616
|
0.491
|
Hoxa2
M03251_2.00 |
Mus musculus |
NNTAATKRNN |
NNYMATTANN |
SELEX
Jolma et al.(2013)
Hoxa2_1
|
0.616
|
0.491
|
pb
M03872_2.00 |
Drosophila melanogaster |
NTRAYKRY |
RYMRTYAN |
SELEX
Nitta et al.(2015)
pb_1
|
0.616
|
0.491
|
HOXA2
M04962_2.00 |
Homo sapiens |
NTAATKRV |
BYMATTAN |
SELEX
Yin et al.(2017)
HOXA2_eDBD_HT-SELEX
|
0.616
|
0.491
|
HOXA2
M04965_2.00 |
Homo sapiens |
NTAATKAB |
VTMATTAN |
SELEX
Yin et al.(2017)
HOXA2_FL_HT-SELEX
|
0.616
|
0.491
|
HOXB2
M05292_2.00 |
Homo sapiens |
BTAATKRV |
BYMATTAV |
SELEX
Yin et al.(2017)
HOXB2_eDBD_HT-SELEX
|
0.616
|
0.491
|
pb
M06545_2.00 |
Drosophila melanogaster |
YTAATKA |
TMATTAR |
B1H
Mathelier et al.(2014)
MA0238.1
|
0.616
|
0.491
|
pb
M06366_2.00 |
Drosophila melanogaster |
BYTAATKA |
TMATTARV |
B1H
Zhu et al.(2011)
Pb_Cell_FBgn0051481
|
0.616
|
0.491
|
pb
M06367_2.00 |
Drosophila melanogaster |
YTAATKA |
TMATTAR |
B1H
Zhu et al.(2011)
Pb_SOLEXA_FBgn0051481
|
0.616
|
0.491
|
Hoxa2
M09566_2.00 |
Mus musculus |
DTGATKGATKDB |
VHMATCMATCAH |
Misc
Heinz et al.(2010)
mES-Hoxa2_Donaldson_et_al.
|
0.616
|
0.491
|
HOXA2
M04963_2.00 |
Homo sapiens |
NTAATTAN |
NTAATTAN |
SELEX
Yin et al.(2017)
HOXA2_eDBD_Methyl-HT-SELEX_1
|
0.616
|
0.491
|
HOXA2
M04964_2.00 |
Homo sapiens |
HTAAYGAB |
VTCRTTAD |
SELEX
Yin et al.(2017)
HOXA2_eDBD_Methyl-HT-SELEX_2
|
0.616
|
0.491
|
HOXA2
M04966_2.00 |
Homo sapiens |
NTAATKAB |
VTMATTAN |
SELEX
Yin et al.(2017)
HOXA2_FL_Methyl-HT-SELEX_1
|
0.616
|
0.491
|
HOXA2
M04967_2.00 |
Homo sapiens |
HTAAYGAB |
VTCRTTAD |
SELEX
Yin et al.(2017)
HOXA2_FL_Methyl-HT-SELEX_2
|
0.616
|
0.491
|
HOXB2
M05293_2.00 |
Homo sapiens |
NTAATKRN |
NYMATTAN |
SELEX
Yin et al.(2017)
HOXB2_eDBD_Methyl-HT-SELEX_1
|
0.616
|
0.491
|
HOXB2
M05294_2.00 |
Homo sapiens |
HTAAYGAB |
VTCRTTAD |
SELEX
Yin et al.(2017)
HOXB2_eDBD_Methyl-HT-SELEX_2
|
0.616
|
0.491
|
Barx1
M00413_2.00 |
Mus musculus |
NNTAAYBDNN |
NNHVRTTANN |
PBM
Berger et al.(2008)
Barx1_2877
|
0.615
|
0.600
|
Barx2
M00457_2.00 |
Mus musculus |
NTAABNDNN |
NNHNVTTAN |
PBM
Berger et al.(2008)
Barx2_3447
|
0.615
|
0.600
|
barx1
M02107_2.00 |
Tetraodon nigroviridis |
NTAAYNNNN |
NNNNRTTAN |
PBM
Weirauch et al.(2014)
pTH6449
|
0.615
|
0.600
|
BARX1
M03144_2.00 |
Homo sapiens |
TAATBGNWWWTTAATBR |
YVATTAAWWWNCVATTA |
SELEX
Jolma et al.(2013)
BARX1_1
|
0.615
|
0.600
|
BARX1
M03145_2.00 |
Homo sapiens |
NTAATBRN |
NYVATTAN |
SELEX
Jolma et al.(2013)
BARX1_2
|
0.615
|
0.600
|
BARX2
M04915_2.00 |
Homo sapiens |
NTAAYKRTTWWN |
NWWAAYMRTTAN |
SELEX
Yin et al.(2017)
BARX2_FL_HT-SELEX
|
0.615
|
0.600
|
Barx1
M09181_2.00 |
Mus musculus |
NNWAAKKGYTWH |
DWARCMMTTWNN |
Misc
Kulakovskiy et al.(2013)
BARX1_MOUSE.H11MO.0.C
|
0.615
|
0.600
|
BARX2
M04916_2.00 |
Homo sapiens |
NTAAYKRTTWWN |
NWWAAYMRTTAN |
SELEX
Yin et al.(2017)
BARX2_FL_Methyl-HT-SELEX
|
0.615
|
0.600
|
eve
M00556_2.00 |
Drosophila melanogaster |
NNTAATTARN |
NYTAATTANN |
PBM
Busser et al.(2012a)
Eve
|
0.613
|
0.473
|
eve
M02115_2.00 |
Drosophila melanogaster |
NTAATNDNN |
NNHNATTAN |
PBM
Weirauch et al.(2014)
pTH6436
|
0.613
|
0.473
|
eve
M03794_2.00 |
Drosophila melanogaster |
VYTAATKASN |
NSTMATTARB |
SELEX
Nitta et al.(2015)
eve_1
|
0.613
|
0.473
|
eve
M06486_2.00 |
Drosophila melanogaster |
YTAATKA |
TMATTAR |
B1H
Mathelier et al.(2014)
MA0221.1
|
0.613
|
0.473
|
eve
M06240_2.00 |
Drosophila melanogaster |
DYTAATKA |
TMATTARH |
B1H
Zhu et al.(2011)
Eve_Cell_FBgn0000606
|
0.613
|
0.473
|
eve
M06241_2.00 |
Drosophila melanogaster |
HKBTAAYNDTKY |
RMAHNRTTAVMD |
B1H
Zhu et al.(2011)
eve_FlyReg_FBgn0000606
|
0.613
|
0.473
|
eve
M06242_2.00 |
Drosophila melanogaster |
NYTAATKA |
TMATTARN |
B1H
Zhu et al.(2011)
Eve_SOLEXA_FBgn0000606
|
0.613
|
0.473
|
eve
M09678_2.00 |
Drosophila melanogaster |
NKHTAATKD |
HMATTADMN |
Misc
Kulakovskiy et al.(2009)
eve
|
0.613
|
0.473
|
eve
M10786_2.00 |
Drosophila melanogaster |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
I$EVE_Q6
|
0.613
|
0.473
|
Barhl1
M00433_2.00 |
Mus musculus |
NTAAWNRNN |
NNYNWTTAN |
PBM
Berger et al.(2008)
Barhl1_2590
|
0.609
|
0.655
|
Barhl1
M03258_2.00 |
Mus musculus |
NNTAAWYGNH |
DNCRWTTANN |
SELEX
Jolma et al.(2013)
Barhl1_1
|
0.609
|
0.655
|
Barhl1
M03259_2.00 |
Mus musculus |
NNTAADNRNN |
NNYNHTTANN |
SELEX
Jolma et al.(2013)
Barhl1_2
|
0.609
|
0.655
|
Barhl1
M03260_2.00 |
Mus musculus |
TAAWYGNYNNTAAWYG |
CRWTTANNRNCRWTTA |
SELEX
Jolma et al.(2013)
Barhl1_3
|
0.609
|
0.655
|
BARHL1
M05091_2.00 |
Homo sapiens |
NTAAWYGN |
NCRWTTAN |
SELEX
Yin et al.(2017)
BARHL1_eDBD_HT-SELEX_1
|
0.609
|
0.655
|
BARHL1
M05092_2.00 |
Homo sapiens |
NTAADBGN |
NCVHTTAN |
SELEX
Yin et al.(2017)
BARHL1_eDBD_HT-SELEX_2
|
0.609
|
0.655
|
BARHL1
M05093_2.00 |
Homo sapiens |
NTAADKGN |
NCMHTTAN |
SELEX
Yin et al.(2017)
BARHL1_eDBD_Methyl-HT-SELEX
|
0.609
|
0.655
|
B-H2
M03810_2.00 |
Drosophila melanogaster |
VNTAAAYGNH |
DNCRTTTANB |
SELEX
Nitta et al.(2015)
B-H2_1
|
0.606
|
0.600
|
B-H2
M03811_2.00 |
Drosophila melanogaster |
SNTAADBGN |
NCVHTTANS |
SELEX
Nitta et al.(2015)
B-H2_2
|
0.606
|
0.600
|
B-H2
M06503_2.00 |
Drosophila melanogaster |
WTAATTG |
CAATTAW |
B1H
Mathelier et al.(2014)
MA0169.1
|
0.606
|
0.600
|
B-H1
M03829_2.00 |
Drosophila melanogaster |
VNTAAWYGNN |
NNCRWTTANB |
SELEX
Nitta et al.(2015)
B-H1_1
|
0.606
|
0.582
|
B-H1
M03830_2.00 |
Drosophila melanogaster |
SNTAADBGN |
NCVHTTANS |
SELEX
Nitta et al.(2015)
B-H1_2
|
0.606
|
0.582
|
B-H1
M06512_2.00 |
Drosophila melanogaster |
HTAAWYG |
CRWTTAD |
B1H
Mathelier et al.(2014)
MA0168.1
|
0.606
|
0.582
|
NEMVEDRAFT_v1g8907
M02154_2.00 |
Nematostella vectensis |
NTAATDRNNN |
NNNYHATTAN |
PBM
Weirauch et al.(2014)
pTH6483
|
0.601
|
0.527
|
For this family, TFs with SR scores > 0.599 will likely have a similar motif |