CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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T265_00628
(
Opisthorchis viverrini
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
T265_00628
T236639_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HESX1
M03187_2.00
Homo sapiens
NHTAATTRVH
DBYAATTADN
SELEX
Jolma et al.(2013)
HESX1_1
0.621
0.270
HESX1
M03188_2.00
Homo sapiens
NTAATTRGYAATTAD
HTAATTRCYAATTAN
SELEX
Jolma et al.(2013)
HESX1_2
0.621
0.270
HESX1
M05227_2.00
Homo sapiens
DYAATTRV
BYAATTRH
SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX
0.621
0.270
HESX1
M05228_2.00
Homo sapiens
NYAATTRD
HYAATTRN
SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX
0.621
0.270
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
T265_00628
Homeodomain
461
506
RKPRILFSQAQIFELESRFKHQRYLSAQEREHLAATLKMSPQQIAS
T265_00628
Homeodomain
548
564
SFEVKIWFQNRRYKVKR
Links
Other
Homeodomain
family TFs
Other
Opisthorchis viverrini
TFs
71 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HNAJ_0000529701
Hymenolepis nana
HNAJ_0000529701
N
0.708
DICVIV_04104
Dictyocaulus viviparus
DICVIV_04104
N
0.682
ECANG7_06360
Echinococcus canadensis
ECANG7_06360
N
0.668
scaffold251-EXSNAP2012.22
Pristionchus exspectatus
scaffold251-EXSNAP2012.22
I
0.661
GF13343
Drosophila ananassae
FBgn0090375
I
0.652
T265_02852
Opisthorchis viverrini
T265_02852
I
0.646
ANCCAN_03327
Ancylostoma caninum
ANCCAN_03327
N
0.645
YQE_10100
Dendroctonus ponderosae
YQE_10100
I
0.644
DLX4
Oryctolagus cuniculus
ENSOCUG00000022067
I
0.643
ENSTSYG00000014450
Tarsius syrichta
ENSTSYG00000014450
I
0.639
D917_01051
Trichinella nativa
D917_01051
I
0.636
EFV57629
Trichinella spiralis
EFV57629
I
0.636
CGI_10016653
Crassostrea gigas
CGI_10016653
I
0.636
meox1
Takifugu rubripes
ENSTRUG00000005193
I
0.634
ASTEI06918
Anopheles stephensi
ASTEI06918
N
0.632
HPLM_0001894101
Haemonchus placei
HPLM_0001894101
I
0.629
ALUE_0001497801
Ascaris lumbricoides
ALUE_0001497801
I
0.625
BGLB013824
Biomphalaria glabrata
BGLB013824
I
0.625
CLEC007171
Cimex lectularius
CLEC007171
I
0.625
NOBOX
Oryctolagus cuniculus
ENSOCUG00000001027
I
0.624
NECAME_16530
Necator americanus
NECAME_16530
I
0.623
HESX1
Homo sapiens
ENSG00000163666
D
0.621
Cmyd_10012400
Chelonia mydas
Cmyd_10012400
I
0.620
TTAC_0000701101
Hydatigera taeniaeformis
TTAC_0000701101
N
0.620
MCOS_0000655901
Mesocestoides corti
MCOS_0000655901
N
0.620
ASIM_0001230001
Anisakis simplex
ASIM_0001230001
I
0.618
NOBOX
Myotis lucifugus
ENSMLUG00000004209
I
0.618
NOBOX
Gorilla gorilla
ENSGGOG00000022185
I
0.618
HelroG173001
Helobdella robusta
HelroG173001
I
0.617
DLX3
Bos taurus
ENSBTAG00000017409
I
0.616
TCNE_0001081001
Toxocara canis
TCNE_0001081001
I
0.616
DLX4
Bos taurus
ENSBTAG00000007353
I
0.613
DLX4
Myotis lucifugus
ENSMLUG00000007268
I
0.613
ENSBTAP00000009672-D1
Bos grunniens
ENSBTAP00000009672-D1
I
0.613
ENSOARG00000005572
Ovis aries
ENSOARG00000005572
I
0.612
NOBOX
Callithrix jacchus
ENSCJAG00000009917
I
0.612
Pvit_13361
Pogona vitticeps
Pvit_13361
I
0.611
DBX1
Tursiops truncatus
ENSTTRG00000000318
N
0.610
NOBOX
Macaca mulatta
ENSMMUG00000020609
I
0.608
ENSMPUG00000007079
Mustela putorius furo
ENSMPUG00000007079
I
0.608
ENSMMUP00000027138
Macaca fascicularis
ENSMMUP00000027138
I
0.608
NOBOX
Felis catus
ENSFCAG00000004352
I
0.608
NOBOX
Equus caballus
ENSECAG00000003123
I
0.608
ENSCSAG00000007090
Chlorocebus sabaeus
ENSCSAG00000007090
I
0.608
HDID_0000333701
Hymenolepis diminuta
HDID_0000333701
N
0.608
NOBOX
Otolemur garnettii
ENSOGAG00000010413
I
0.608
ENSNLEG00000003406
Nomascus leucogenys
ENSNLEG00000003406
I
0.608
Myotis_brandtii_NOBOX_10026198
Myotis brandtii
Myotis_brandtii_NOBOX_10026198
I
0.608
ENSP00000419457-D1
Bos grunniens
ENSP00000419457-D1
I
0.608
ENSPANG00000018829
Papio anubis
ENSPANG00000018829
I
0.608
TELCIR_07728
Teladorsagia circumcincta
TELCIR_07728
I
0.607
ENSFCAG00000029037
Felis catus
ENSFCAG00000029037
I
0.607
ANCCEY_04248
Ancylostoma ceylanicum
ANCCEY_04248
N
0.607
tetur14g02510
Tetranychus urticae
tetur14g02510
I
0.606
NBR_0000705501
Nippostrongylus brasiliensis
NBR_0000705501
I
0.604
SROB_0001564301
Schistosoma rodhaini
SROB_0001564301
I
0.604
GF12207
Drosophila ananassae
FBgn0089246
I
0.603
Ogr09065
Ophisaurus gracilis
Ogr09065
I
0.603
SSLN_0001460801
Schistocephalus solidus
SSLN_0001460801
I
0.602
Cmyd_10001740
Chelonia mydas
Cmyd_10001740
I
0.602
HPLM_0000971301
Haemonchus placei
HPLM_0000971301
I
0.602
BGIBMGA003233
Bombyx mori
BGIBMGA003233
I
0.601
DBX1
Gorilla gorilla
ENSGGOG00000014848
N
0.600
Dbx1
Dipodomys ordii
ENSDORG00000009286
N
0.600
DBX1
Callithrix jacchus
ENSCJAG00000006734
I
0.600
ENSNLEG00000017811
Nomascus leucogenys
ENSNLEG00000017811
N
0.600
DBX1
Pan troglodytes
ENSPTRG00000003437
N
0.600
DILT_0000101001
Diphyllobothrium latum
DILT_0000101001
N
0.599
TTAC_0000027101
Hydatigera taeniaeformis
TTAC_0000027101
I
0.599
DICVIV_02647
Dictyocaulus viviparus
DICVIV_02647
I
0.599
Gfo_R002825
Geospiza fortis
Gfo_R002825
I
0.599