CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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YQE_10100
(
Dendroctonus ponderosae
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
YQE_10100
T224826_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HESX1
M03187_2.00
Homo sapiens
NHTAATTRVH
DBYAATTADN
SELEX
Jolma et al.(2013)
HESX1_1
0.713
0.286
HESX1
M03188_2.00
Homo sapiens
NTAATTRGYAATTAD
HTAATTRCYAATTAN
SELEX
Jolma et al.(2013)
HESX1_2
0.713
0.286
HESX1
M05227_2.00
Homo sapiens
DYAATTRV
BYAATTRH
SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX
0.713
0.286
HESX1
M05228_2.00
Homo sapiens
NYAATTRD
HYAATTRN
SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX
0.713
0.286
NOBOX
M09135_2.00
Homo sapiens
HTAATTRVB
VBYAATTAD
Misc
Kulakovskiy et al.(2013)
NOBOX_HUMAN.H11MO.0.C
0.694
0.349
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENN73340
Homeodomain
74
118
RKPRTPFTTQQLLALEKKFRDKQYLSIAERAEFSSSLRLTETQVD
ENN73340
Homeodomain
123
140
LYCSVKIWFQNRRAKAKR
Links
Other
Homeodomain
family TFs
Other
Dendroctonus ponderosae
TFs
149 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HelroG173001
Helobdella robusta
HelroG173001
I
0.764
CGI_10016653
Crassostrea gigas
CGI_10016653
I
0.760
tetur14g02510
Tetranychus urticae
tetur14g02510
I
0.754
GF12207
Drosophila ananassae
FBgn0089246
I
0.752
meox1
Takifugu rubripes
ENSTRUG00000005193
I
0.752
Ogr09065
Ophisaurus gracilis
Ogr09065
I
0.750
DICVIV_02647
Dictyocaulus viviparus
DICVIV_02647
I
0.747
D917_01051
Trichinella nativa
D917_01051
I
0.743
EFV57629
Trichinella spiralis
EFV57629
I
0.743
GF13343
Drosophila ananassae
FBgn0090375
I
0.743
ALUE_0001497801
Ascaris lumbricoides
ALUE_0001497801
I
0.741
TTRE_0000072001
Trichuris trichiura
TTRE_0000072001
I
0.741
CLEC007171
Cimex lectularius
CLEC007171
I
0.741
DLX4
Oryctolagus cuniculus
ENSOCUG00000022067
I
0.741
MCOS_0000004601
Mesocestoides corti
MCOS_0000004601
I
0.739
nRc.2.0.1.g34428
Romanomermis culicivorax
nRc.2.0.1.g34428
I
0.739
HMEL006244
Heliconius melpomene
HMEL006244
I
0.737
SNAPOd2T00016706001
Oikopleura dioica
SNAPOd2T00016706001
I
0.737
TELCIR_07728
Teladorsagia circumcincta
TELCIR_07728
I
0.735
ADAC008104
Anopheles darlingi
ADAC008104
I
0.734
L892_g24303
Steinernema scapterisci
L892_g24303
I
0.734
SPU_004366
Strongylocentrotus purpuratus
SPU_004366
I
0.732
NOBOX
Oryctolagus cuniculus
ENSOCUG00000001027
I
0.730
PRRX2
Cavia porcellus
ENSCPOG00000021821
I
0.729
Cmyd_10001740
Chelonia mydas
Cmyd_10001740
I
0.726
DLX3
Bos taurus
ENSBTAG00000017409
I
0.726
BGLB013824
Biomphalaria glabrata
BGLB013824
I
0.726
Cflo_02794--XP_001120105.1_APIME
Camponotus floridanus
Cflo_02794--XP_001120105.1_APIME
I
0.725
ASIM_0001230001
Anisakis simplex
ASIM_0001230001
I
0.724
EFV55592
Trichinella spiralis
EFV55592
I
0.723
GK22877
Drosophila willistoni
FBgn0224839
I
0.723
HPLM_0001894101
Haemonchus placei
HPLM_0001894101
I
0.722
ENSBTAP00000009672-D1
Bos grunniens
ENSBTAP00000009672-D1
I
0.721
DLX4
Bos taurus
ENSBTAG00000007353
I
0.721
ENSOARG00000005572
Ovis aries
ENSOARG00000005572
I
0.720
HPLM_0000971301
Haemonchus placei
HPLM_0000971301
I
0.720
ADAC001468
Anopheles darlingi
ADAC001468
I
0.719
MCINX008871
Melitaea cinxia
MCINX008871
I
0.718
SSLN_0001460801
Schistocephalus solidus
SSLN_0001460801
I
0.717
ENSP00000419457-D1
Bos grunniens
ENSP00000419457-D1
I
0.716
nLs.2.1.2.g05836
Litomosoides sigmodontis
nLs.2.1.2.g05836
I
0.715
Cflo_04174--XP_001120833.1_APIME
Camponotus floridanus
Cflo_04174--XP_001120833.1_APIME
I
0.715
ENSMMUP00000027138
Macaca fascicularis
ENSMMUP00000027138
I
0.714
Myotis_brandtii_NOBOX_10026198
Myotis brandtii
Myotis_brandtii_NOBOX_10026198
I
0.714
Pvit_13361
Pogona vitticeps
Pvit_13361
I
0.714
NOBOX
Callithrix jacchus
ENSCJAG00000009917
I
0.714
NOBOX
Gorilla gorilla
ENSGGOG00000022185
I
0.714
NOBOX
Felis catus
ENSFCAG00000004352
I
0.714
NOBOX
Equus caballus
ENSECAG00000003123
I
0.714
ENSCSAG00000007090
Chlorocebus sabaeus
ENSCSAG00000007090
I
0.714
ENSPANG00000018829
Papio anubis
ENSPANG00000018829
I
0.714
NOBOX
Myotis lucifugus
ENSMLUG00000004209
I
0.714
ENSMPUG00000007079
Mustela putorius furo
ENSMPUG00000007079
I
0.714
ENSACAG00000002147
Anolis carolinensis
ENSACAG00000002147
I
0.714
NOBOX
Macaca mulatta
ENSMMUG00000020609
I
0.714
NOBOX
Otolemur garnettii
ENSOGAG00000010413
I
0.714
ENSNLEG00000003406
Nomascus leucogenys
ENSNLEG00000003406
I
0.714
HESX1
Homo sapiens
ENSG00000163666
D
0.713
DLX4
Myotis lucifugus
ENSMLUG00000007268
I
0.712
TC000483
Tribolium castaneum
TC000483
I
0.711
Aan_R011917
Calypte anna
Aan_R011917
I
0.711
ENSP00000360811-D1
Bos grunniens
ENSP00000360811-D1
I
0.710
drgx
Takifugu rubripes
ENSTRUG00000013446
I
0.710
L798_06393
Zootermopsis nevadensis
L798_06393
I
0.708
BGLB004491
Biomphalaria glabrata
BGLB004491
I
0.707
PPAI007004
Phlebotomus papatasi
PPAI007004
I
0.706
MCINX007054
Melitaea cinxia
MCINX007054
I
0.705
HPBE_0000873701
Heligmosomoides bakeri
HPBE_0000873701
I
0.704
ENSSTOG00000026570
Ictidomys tridecemlineatus
ENSSTOG00000026570
I
0.700
Gfo_R002825
Geospiza fortis
Gfo_R002825
I
0.700
ACUA004306
Anopheles culicifacies
ACUA004306
I
0.698
EVEC_0000357701
Enterobius vermicularis
EVEC_0000357701
I
0.698
TTAC_0000027101
Hydatigera taeniaeformis
TTAC_0000027101
I
0.697
NBR_0000705501
Nippostrongylus brasiliensis
NBR_0000705501
I
0.696
Cmyd_10012400
Chelonia mydas
Cmyd_10012400
I
0.695
NOBOX
Homo sapiens
ENSG00000106410
D
0.694
NOBOX
Pan troglodytes
ENSPTRG00000019828
I
0.694
ENSTSYG00000014450
Tarsius syrichta
ENSTSYG00000014450
I
0.692
ENSPSIG00000014030
Pelodiscus sinensis
ENSPSIG00000014030
I
0.690
ENSMGAG00000013900
Meleagris gallopavo
ENSMGAG00000013900
I
0.690
ENSAMEG00000004942
Ailuropoda melanoleuca
ENSAMEG00000004942
I
0.690
NECAME_16530
Necator americanus
NECAME_16530
I
0.687
SINV13346
Solenopsis invicta
SINV13346
I
0.686
ALUE_0000848601
Ascaris lumbricoides
ALUE_0000848601
I
0.685
ECANG7_01330
Echinococcus canadensis
ECANG7_01330
I
0.684
LDEC008146
Leptinotarsa decemlineata
LDEC008146
I
0.683
CGI_10009720
Crassostrea gigas
CGI_10009720
I
0.683
tetur02g13510
Tetranychus urticae
tetur02g13510
I
0.683
T265_14002
Opisthorchis viverrini
T265_14002
I
0.683
ENSMODG00000001675
Monodelphis domestica
ENSMODG00000001675
I
0.680
NOBOX
Canis familiaris
ENSCAFG00000003500
I
0.676
Ogr03859
Ophisaurus gracilis
Ogr03859
I
0.674
OESDEN_01216
Oesophagostomum dentatum
OESDEN_01216
I
0.672
ENSLACG00000001487
Latimeria chalumnae
ENSLACG00000001487
I
0.671
BGIBMGA003233
Bombyx mori
BGIBMGA003233
I
0.671
TCNE_0001081001
Toxocara canis
TCNE_0001081001
I
0.669
EEL_0000220001
Elaeophora elaphi
EEL_0000220001
I
0.669
AFAF008499
Anopheles farauti
AFAF008499
I
0.669
L798_11440
Zootermopsis nevadensis
L798_11440
I
0.666
Alligator_sinensis_CCG014496.1
Alligator sinensis
Alligator_sinensis_CCG014496.1
I
0.665
ANCCAN_10593
Ancylostoma caninum
ANCCAN_10593
I
0.664
ENSFCAG00000029037
Felis catus
ENSFCAG00000029037
I
0.663
ASTEI06918
Anopheles stephensi
ASTEI06918
N
0.656
AMAM000848
Anopheles maculatus
AMAM000848
I
0.651
ACUA026833
Anopheles culicifacies
ACUA026833
I
0.651
BGLB009341
Biomphalaria glabrata
BGLB009341
I
0.650
nRc.2.0.1.g35501
Romanomermis culicivorax
nRc.2.0.1.g35501
I
0.648
TTAC_0000701101
Hydatigera taeniaeformis
TTAC_0000701101
N
0.647
MCOS_0000655901
Mesocestoides corti
MCOS_0000655901
N
0.647
HDID_0000333701
Hymenolepis diminuta
HDID_0000333701
N
0.647
fgenesh2_pg.scaffold_23000163
Branchiostoma floridae
fgenesh2_pg.scaffold_23000163
I
0.647
ENSCSAVG00000000940
Ciona savignyi
ENSCSAVG00000000940
I
0.644
T265_00628
Opisthorchis viverrini
T265_00628
I
0.644
NEMVEDRAFT_v1g198584
Nematostella vectensis
NEMVEDRAFT_v1g198584
I
0.644
TELCIR_10796
Teladorsagia circumcincta
TELCIR_10796
I
0.642
HCOI01026600
Haemonchus contortus
HCOI01026600
I
0.642
TCNE_0000653501
Toxocara canis
TCNE_0000653501
I
0.641
LHX6
Gorilla gorilla
ENSGGOG00000008310
I
0.635
T265_02852
Opisthorchis viverrini
T265_02852
I
0.633
DICVIV_04104
Dictyocaulus viviparus
DICVIV_04104
N
0.633
PEQ_0001388201
Parascaris equorum
PEQ_0001388201
I
0.631
SVUK_0001056001
Strongylus vulgaris
SVUK_0001056001
I
0.626
L798_10521
Zootermopsis nevadensis
L798_10521
N
0.622
CpipJ_CPIJ006790
Culex pipiens
CpipJ_CPIJ006790
N
0.622
CPIJ006790
Culex quinquefasciatus
CPIJ006790
N
0.622
GM12914
Drosophila sechellia
FBgn0167846
I
0.617
Cmyd_10006547
Chelonia mydas
Cmyd_10006547
N
0.617
scaffold251-EXSNAP2012.22
Pristionchus exspectatus
scaffold251-EXSNAP2012.22
I
0.616
DBX1
Tursiops truncatus
ENSTTRG00000000318
N
0.615
ENSNLEG00000017811
Nomascus leucogenys
ENSNLEG00000017811
N
0.615
DBX1
Gorilla gorilla
ENSGGOG00000014848
N
0.615
DBX1
Pan troglodytes
ENSPTRG00000003437
N
0.615
Dbx1
Dipodomys ordii
ENSDORG00000009286
N
0.615
L892_g9682
Steinernema scapterisci
L892_g9682
I
0.613
ENSBTAP00000049813-D5
Bos grunniens
ENSBTAP00000049813-D5
I
0.612
EFV53972
Trichinella spiralis
EFV53972
N
0.611
HNAJ_0000529701
Hymenolepis nana
HNAJ_0000529701
N
0.609
ENSPPYG00000003422
Pongo abelii
ENSPPYG00000003422
N
0.609
DBX1
Callithrix jacchus
ENSCJAG00000006734
I
0.607
DBX1
Ochotona princeps
ENSOPRG00000012954
N
0.605
SPU_006159
Strongylocentrotus purpuratus
SPU_006159
N
0.603
MIXL1
Callithrix jacchus
ENSCJAG00000012740
I
0.603
ENSSTOG00000019392
Ictidomys tridecemlineatus
ENSSTOG00000019392
N
0.603
BGLB009977
Biomphalaria glabrata
BGLB009977
I
0.602
BGLB014161
Biomphalaria glabrata
BGLB014161
I
0.602
HMEL016421
Heliconius melpomene
HMEL016421
I
0.602
PEQ_0001069001
Parascaris equorum
PEQ_0001069001
I
0.602
L798_02534
Zootermopsis nevadensis
L798_02534
N
0.600
HPLM_0000384301
Haemonchus placei
HPLM_0000384301
N
0.599