CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TC000483
(
Tribolium castaneum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
TC000483
T223796_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NOBOX
M09135_2.00
Homo sapiens
HTAATTRVB
VBYAATTAD
Misc
Kulakovskiy et al.(2013)
NOBOX_HUMAN.H11MO.0.C
0.691
0.426
HESX1
M03187_2.00
Homo sapiens
NHTAATTRVH
DBYAATTADN
SELEX
Jolma et al.(2013)
HESX1_1
0.661
0.213
HESX1
M03188_2.00
Homo sapiens
NTAATTRGYAATTAD
HTAATTRCYAATTAN
SELEX
Jolma et al.(2013)
HESX1_2
0.661
0.213
HESX1
M05227_2.00
Homo sapiens
DYAATTRV
BYAATTRH
SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX
0.661
0.213
HESX1
M05228_2.00
Homo sapiens
NYAATTRD
HYAATTRN
SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX
0.661
0.213
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TC000483-PA
Homeodomain
142
186
KRVRTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLQLTEAQVS
TC000483-PA
Homeodomain
199
214
LQVKVWFQNRRIKWRK
Links
Other
Homeodomain
family TFs
Other
Tribolium castaneum
TFs
141 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACUA004306
Anopheles culicifacies
ACUA004306
I
0.817
LDEC008146
Leptinotarsa decemlineata
LDEC008146
I
0.808
MCOS_0000004601
Mesocestoides corti
MCOS_0000004601
I
0.772
HPLM_0000971301
Haemonchus placei
HPLM_0000971301
I
0.770
ANCCAN_10593
Ancylostoma caninum
ANCCAN_10593
I
0.767
ASIM_0001230001
Anisakis simplex
ASIM_0001230001
I
0.766
Ogr09065
Ophisaurus gracilis
Ogr09065
I
0.761
EFV55592
Trichinella spiralis
EFV55592
I
0.761
Cmyd_10001740
Chelonia mydas
Cmyd_10001740
I
0.760
GK22877
Drosophila willistoni
FBgn0224839
I
0.753
SSLN_0001460801
Schistocephalus solidus
SSLN_0001460801
I
0.751
HMEL006244
Heliconius melpomene
HMEL006244
I
0.743
TTRE_0000072001
Trichuris trichiura
TTRE_0000072001
I
0.743
ADAC001468
Anopheles darlingi
ADAC001468
I
0.739
L892_g24303
Steinernema scapterisci
L892_g24303
I
0.738
NOBOX
Oryctolagus cuniculus
ENSOCUG00000001027
I
0.737
Ogr03859
Ophisaurus gracilis
Ogr03859
I
0.736
CLEC007171
Cimex lectularius
CLEC007171
I
0.733
ADAC008104
Anopheles darlingi
ADAC008104
I
0.730
nRc.2.0.1.g34428
Romanomermis culicivorax
nRc.2.0.1.g34428
I
0.729
SPU_004366
Strongylocentrotus purpuratus
SPU_004366
I
0.727
Myotis_brandtii_NOBOX_10026198
Myotis brandtii
Myotis_brandtii_NOBOX_10026198
I
0.726
ENSMPUG00000007079
Mustela putorius furo
ENSMPUG00000007079
I
0.726
meox1
Takifugu rubripes
ENSTRUG00000005193
I
0.726
GF13343
Drosophila ananassae
FBgn0090375
I
0.725
ENSAMEG00000004942
Ailuropoda melanoleuca
ENSAMEG00000004942
I
0.724
CGI_10016653
Crassostrea gigas
CGI_10016653
I
0.723
ALUE_0001497801
Ascaris lumbricoides
ALUE_0001497801
I
0.723
GF12207
Drosophila ananassae
FBgn0089246
I
0.722
ENSMMUP00000027138
Macaca fascicularis
ENSMMUP00000027138
I
0.721
ENSP00000419457-D1
Bos grunniens
ENSP00000419457-D1
I
0.721
MCINX008871
Melitaea cinxia
MCINX008871
I
0.721
ENSPANG00000018829
Papio anubis
ENSPANG00000018829
I
0.721
ENSNLEG00000003406
Nomascus leucogenys
ENSNLEG00000003406
I
0.721
NOBOX
Felis catus
ENSFCAG00000004352
I
0.721
ENSCSAG00000007090
Chlorocebus sabaeus
ENSCSAG00000007090
I
0.721
NOBOX
Macaca mulatta
ENSMMUG00000020609
I
0.721
ENSPSIG00000014030
Pelodiscus sinensis
ENSPSIG00000014030
I
0.721
BGLB013824
Biomphalaria glabrata
BGLB013824
I
0.720
DICVIV_02647
Dictyocaulus viviparus
DICVIV_02647
I
0.719
SNAPOd2T00016706001
Oikopleura dioica
SNAPOd2T00016706001
I
0.718
DLX3
Bos taurus
ENSBTAG00000017409
I
0.718
nLs.2.1.2.g05836
Litomosoides sigmodontis
nLs.2.1.2.g05836
I
0.717
NOBOX
Myotis lucifugus
ENSMLUG00000004209
I
0.716
DLX4
Oryctolagus cuniculus
ENSOCUG00000022067
I
0.716
BGLB004491
Biomphalaria glabrata
BGLB004491
I
0.715
EFV57629
Trichinella spiralis
EFV57629
I
0.714
ENSACAG00000002147
Anolis carolinensis
ENSACAG00000002147
I
0.714
D917_01051
Trichinella nativa
D917_01051
I
0.714
ENSP00000360811-D1
Bos grunniens
ENSP00000360811-D1
I
0.711
YQE_10100
Dendroctonus ponderosae
YQE_10100
I
0.711
NOBOX
Equus caballus
ENSECAG00000003123
I
0.711
NOBOX
Gorilla gorilla
ENSGGOG00000022185
I
0.711
NOBOX
Otolemur garnettii
ENSOGAG00000010413
I
0.711
Pvit_13361
Pogona vitticeps
Pvit_13361
I
0.710
MCINX007054
Melitaea cinxia
MCINX007054
I
0.709
nRc.2.0.1.g35501
Romanomermis culicivorax
nRc.2.0.1.g35501
I
0.706
T265_14002
Opisthorchis viverrini
T265_14002
I
0.706
HPLM_0001894101
Haemonchus placei
HPLM_0001894101
I
0.705
TELCIR_07728
Teladorsagia circumcincta
TELCIR_07728
I
0.705
NOBOX
Callithrix jacchus
ENSCJAG00000009917
I
0.705
drgx
Takifugu rubripes
ENSTRUG00000013446
I
0.704
Aan_R011917
Calypte anna
Aan_R011917
I
0.704
NBR_0000705501
Nippostrongylus brasiliensis
NBR_0000705501
I
0.703
Cflo_04174--XP_001120833.1_APIME
Camponotus floridanus
Cflo_04174--XP_001120833.1_APIME
I
0.703
HPBE_0000873701
Heligmosomoides bakeri
HPBE_0000873701
I
0.702
ENSSTOG00000026570
Ictidomys tridecemlineatus
ENSSTOG00000026570
I
0.701
L798_11440
Zootermopsis nevadensis
L798_11440
I
0.700
DLX4
Bos taurus
ENSBTAG00000007353
I
0.696
ENSBTAP00000009672-D1
Bos grunniens
ENSBTAP00000009672-D1
I
0.696
ENSOARG00000005572
Ovis aries
ENSOARG00000005572
I
0.695
PPAI007004
Phlebotomus papatasi
PPAI007004
I
0.693
PRRX2
Cavia porcellus
ENSCPOG00000021821
I
0.693
NOBOX
Homo sapiens
ENSG00000106410
D
0.691
ENSMGAG00000013900
Meleagris gallopavo
ENSMGAG00000013900
I
0.691
NOBOX
Pan troglodytes
ENSPTRG00000019828
I
0.691
L798_06393
Zootermopsis nevadensis
L798_06393
I
0.691
SINV13346
Solenopsis invicta
SINV13346
I
0.690
TTAC_0000027101
Hydatigera taeniaeformis
TTAC_0000027101
I
0.689
NECAME_16530
Necator americanus
NECAME_16530
I
0.689
Cflo_02794--XP_001120105.1_APIME
Camponotus floridanus
Cflo_02794--XP_001120105.1_APIME
I
0.689
TCNE_0001081001
Toxocara canis
TCNE_0001081001
I
0.682
HelroG173001
Helobdella robusta
HelroG173001
I
0.682
DLX4
Myotis lucifugus
ENSMLUG00000007268
I
0.681
EVEC_0000357701
Enterobius vermicularis
EVEC_0000357701
I
0.674
EEL_0000220001
Elaeophora elaphi
EEL_0000220001
I
0.673
T265_02852
Opisthorchis viverrini
T265_02852
I
0.673
NOBOX
Canis familiaris
ENSCAFG00000003500
I
0.673
PEQ_0001388201
Parascaris equorum
PEQ_0001388201
I
0.672
Gfo_R002825
Geospiza fortis
Gfo_R002825
I
0.672
Cmyd_10012400
Chelonia mydas
Cmyd_10012400
I
0.670
ENSMODG00000001675
Monodelphis domestica
ENSMODG00000001675
I
0.669
ENSTSYG00000014450
Tarsius syrichta
ENSTSYG00000014450
I
0.666
CGI_10009720
Crassostrea gigas
CGI_10009720
I
0.663
ECANG7_01330
Echinococcus canadensis
ECANG7_01330
I
0.662
AFAF008499
Anopheles farauti
AFAF008499
I
0.661
HESX1
Homo sapiens
ENSG00000163666
D
0.661
ENSCSAVG00000000940
Ciona savignyi
ENSCSAVG00000000940
I
0.661
ALUE_0000848601
Ascaris lumbricoides
ALUE_0000848601
I
0.660
ENSLACG00000001487
Latimeria chalumnae
ENSLACG00000001487
I
0.658
ENSFCAG00000029037
Felis catus
ENSFCAG00000029037
I
0.655
tetur14g02510
Tetranychus urticae
tetur14g02510
I
0.651
LHX6
Gorilla gorilla
ENSGGOG00000008310
I
0.649
tetur02g13510
Tetranychus urticae
tetur02g13510
I
0.647
BGIBMGA003233
Bombyx mori
BGIBMGA003233
I
0.646
ANCCEY_04248
Ancylostoma ceylanicum
ANCCEY_04248
N
0.644
AMAM000848
Anopheles maculatus
AMAM000848
I
0.643
ACUA026833
Anopheles culicifacies
ACUA026833
I
0.643
Alligator_sinensis_CCG014496.1
Alligator sinensis
Alligator_sinensis_CCG014496.1
I
0.641
SVUK_0001056001
Strongylus vulgaris
SVUK_0001056001
I
0.641
fgenesh2_pg.scaffold_23000163
Branchiostoma floridae
fgenesh2_pg.scaffold_23000163
I
0.640
TTAC_0000701101
Hydatigera taeniaeformis
TTAC_0000701101
N
0.638
HDID_0000333701
Hymenolepis diminuta
HDID_0000333701
N
0.636
HCOI01026600
Haemonchus contortus
HCOI01026600
I
0.633
TELCIR_10796
Teladorsagia circumcincta
TELCIR_10796
I
0.633
MCOS_0000655901
Mesocestoides corti
MCOS_0000655901
N
0.628
HNAJ_0000529701
Hymenolepis nana
HNAJ_0000529701
N
0.627
OESDEN_01216
Oesophagostomum dentatum
OESDEN_01216
I
0.623
BGLB009341
Biomphalaria glabrata
BGLB009341
I
0.623
ASTEI06918
Anopheles stephensi
ASTEI06918
N
0.622
Cmyd_10006547
Chelonia mydas
Cmyd_10006547
N
0.621
TTRE_0000266401
Trichuris trichiura
TTRE_0000266401
N
0.620
TCLT_0000598301
Thelazia callipaeda
TCLT_0000598301
N
0.620
ENSNLEG00000017811
Nomascus leucogenys
ENSNLEG00000017811
N
0.618
DBX1
Pan troglodytes
ENSPTRG00000003437
N
0.618
DBX1
Gorilla gorilla
ENSGGOG00000014848
N
0.618
DBX1
Tursiops truncatus
ENSTTRG00000000318
N
0.618
Dbx1
Dipodomys ordii
ENSDORG00000009286
N
0.618
EFV53972
Trichinella spiralis
EFV53972
N
0.613
ENSPPYG00000003422
Pongo abelii
ENSPPYG00000003422
N
0.611
GM12914
Drosophila sechellia
FBgn0167846
I
0.611
HMEL016421
Heliconius melpomene
HMEL016421
I
0.610
SROB_0001564301
Schistosoma rodhaini
SROB_0001564301
I
0.609
DBX1
Callithrix jacchus
ENSCJAG00000006734
I
0.609
NEMVEDRAFT_v1g198584
Nematostella vectensis
NEMVEDRAFT_v1g198584
I
0.608
DBX1
Ochotona princeps
ENSOPRG00000012954
N
0.608
BGLB014161
Biomphalaria glabrata
BGLB014161
I
0.607
L892_g9682
Steinernema scapterisci
L892_g9682
I
0.605
L798_02534
Zootermopsis nevadensis
L798_02534
N
0.604
CpipJ_CPIJ006790
Culex pipiens
CpipJ_CPIJ006790
N
0.600
CPIJ006790
Culex quinquefasciatus
CPIJ006790
N
0.600