nRc.2.0.1.g34428 (Romanomermis culicivorax)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 nRc.2.0.1.g34428 T235549_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HESX1
M03187_2.00 		Homo sapiens
NHTAATTRVH
DBYAATTADN		 SELEX
Jolma et al.(2013)
HESX1_1 		0.708 0.271
HESX1
M03188_2.00 		Homo sapiens
NTAATTRGYAATTAD
HTAATTRCYAATTAN		 SELEX
Jolma et al.(2013)
HESX1_2 		0.708 0.271
HESX1
M05227_2.00 		Homo sapiens
DYAATTRV
BYAATTRH		 SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX 		0.708 0.271
HESX1
M05228_2.00 		Homo sapiens
NYAATTRD
HYAATTRN		 SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX 		0.708 0.271
NOBOX
M09135_2.00 		Homo sapiens
HTAATTRVB
VBYAATTAD		 Misc
Kulakovskiy et al.(2013)
NOBOX_HUMAN.H11MO.0.C 		0.701 0.475
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nRc.2.0.1.t34428-RA Homeodomain 138 183
nRc.2.0.1.t34428-RA Homeodomain 202 214

Links

Other Homeodomain family TFs
Other Romanomermis culicivorax TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPU_004366 Strongylocentrotus purpuratus SPU_004366 I 0.811
Ogr09065 Ophisaurus gracilis Ogr09065 I 0.810
TTRE_0000072001 Trichuris trichiura TTRE_0000072001 I 0.809
L892_g24303 Steinernema scapterisci L892_g24303 I 0.809
DICVIV_02647 Dictyocaulus viviparus DICVIV_02647 I 0.799
ADAC008104 Anopheles darlingi ADAC008104 I 0.799
MCOS_0000004601 Mesocestoides corti MCOS_0000004601 I 0.798
GK22877 Drosophila willistoni FBgn0224839 I 0.795
EFV55592 Trichinella spiralis EFV55592 I 0.795
Cflo_04174--XP_001120833.1_APIME Camponotus floridanus Cflo_04174--XP_001120833.1_APIME I 0.788
SNAPOd2T00016706001 Oikopleura dioica SNAPOd2T00016706001 I 0.787
PPAI007004 Phlebotomus papatasi PPAI007004 I 0.784
GF12207 Drosophila ananassae FBgn0089246 I 0.779
drgx Takifugu rubripes ENSTRUG00000013446 I 0.775
HMEL006244 Heliconius melpomene HMEL006244 I 0.774
ADAC001468 Anopheles darlingi ADAC001468 I 0.774
Cflo_02794--XP_001120105.1_APIME Camponotus floridanus Cflo_02794--XP_001120105.1_APIME I 0.770
MCINX008871 Melitaea cinxia MCINX008871 I 0.765
Aan_R011917 Calypte anna Aan_R011917 I 0.749
NBR_0000705501 Nippostrongylus brasiliensis NBR_0000705501 I 0.742
YQE_10100 Dendroctonus ponderosae YQE_10100 I 0.739
PRRX2 Cavia porcellus ENSCPOG00000021821 I 0.738
ASIM_0001230001 Anisakis simplex ASIM_0001230001 I 0.736
ENSMPUG00000007079 Mustela putorius furo ENSMPUG00000007079 I 0.731
NOBOX Macaca mulatta ENSMMUG00000020609 I 0.731
ENSNLEG00000003406 Nomascus leucogenys ENSNLEG00000003406 I 0.731
NOBOX Oryctolagus cuniculus ENSOCUG00000001027 I 0.731
ENSCSAG00000007090 Chlorocebus sabaeus ENSCSAG00000007090 I 0.731
ENSMMUP00000027138 Macaca fascicularis ENSMMUP00000027138 I 0.731
ENSP00000419457-D1 Bos grunniens ENSP00000419457-D1 I 0.731
TTAC_0000027101 Hydatigera taeniaeformis TTAC_0000027101 I 0.731
NOBOX Felis catus ENSFCAG00000004352 I 0.731
ENSPANG00000018829 Papio anubis ENSPANG00000018829 I 0.731
ENSACAG00000002147 Anolis carolinensis ENSACAG00000002147 I 0.731
Myotis_brandtii_NOBOX_10026198 Myotis brandtii Myotis_brandtii_NOBOX_10026198 I 0.731
TC000483 Tribolium castaneum TC000483 I 0.729
HPLM_0000971301 Haemonchus placei HPLM_0000971301 I 0.729
CLEC007171 Cimex lectularius CLEC007171 I 0.728
ENSP00000360811-D1 Bos grunniens ENSP00000360811-D1 I 0.728
MCINX007054 Melitaea cinxia MCINX007054 I 0.726
HelroG173001 Helobdella robusta HelroG173001 I 0.724
HPBE_0000873701 Heligmosomoides bakeri HPBE_0000873701 I 0.722
NOBOX Myotis lucifugus ENSMLUG00000004209 I 0.721
NOBOX Otolemur garnettii ENSOGAG00000010413 I 0.721
NOBOX Gorilla gorilla ENSGGOG00000022185 I 0.721
NOBOX Callithrix jacchus ENSCJAG00000009917 I 0.721
NOBOX Equus caballus ENSECAG00000003123 I 0.721
Pvit_13361 Pogona vitticeps Pvit_13361 I 0.721
Cmyd_10012400 Chelonia mydas Cmyd_10012400 I 0.720
ALUE_0001497801 Ascaris lumbricoides ALUE_0001497801 I 0.719
SINV13346 Solenopsis invicta SINV13346 I 0.717
Cmyd_10001740 Chelonia mydas Cmyd_10001740 I 0.713
ENSMGAG00000013900 Meleagris gallopavo ENSMGAG00000013900 I 0.713
GF13343 Drosophila ananassae FBgn0090375 I 0.711
SSLN_0001460801 Schistocephalus solidus SSLN_0001460801 I 0.711
EEL_0000220001 Elaeophora elaphi EEL_0000220001 I 0.708
HESX1 Homo sapiens ENSG00000163666 D 0.708
ENSSTOG00000026570 Ictidomys tridecemlineatus ENSSTOG00000026570 I 0.707
meox1 Takifugu rubripes ENSTRUG00000005193 I 0.705
ACUA004306 Anopheles culicifacies ACUA004306 I 0.705
NECAME_16530 Necator americanus NECAME_16530 I 0.704
BGLB004491 Biomphalaria glabrata BGLB004491 I 0.703
LDEC008146 Leptinotarsa decemlineata LDEC008146 I 0.702
BGLB013824 Biomphalaria glabrata BGLB013824 I 0.702
AFAF008499 Anopheles farauti AFAF008499 I 0.702
NOBOX Pan troglodytes ENSPTRG00000019828 I 0.701
NOBOX Homo sapiens ENSG00000106410 D 0.701
D917_01051 Trichinella nativa D917_01051 I 0.700
CGI_10016653 Crassostrea gigas CGI_10016653 I 0.700
EFV57629 Trichinella spiralis EFV57629 I 0.700
DLX4 Oryctolagus cuniculus ENSOCUG00000022067 I 0.695
Ogr03859 Ophisaurus gracilis Ogr03859 I 0.695
TELCIR_07728 Teladorsagia circumcincta TELCIR_07728 I 0.692
nLs.2.1.2.g05836 Litomosoides sigmodontis nLs.2.1.2.g05836 I 0.688
fgenesh2_pg.scaffold_23000163 Branchiostoma floridae fgenesh2_pg.scaffold_23000163 I 0.688
T265_14002 Opisthorchis viverrini T265_14002 I 0.687
L798_06393 Zootermopsis nevadensis L798_06393 I 0.686
ENSMODG00000001675 Monodelphis domestica ENSMODG00000001675 I 0.685
CpipJ_CPIJ006790 Culex pipiens CpipJ_CPIJ006790 N 0.684
CPIJ006790 Culex quinquefasciatus CPIJ006790 N 0.684
ENSAMEG00000004942 Ailuropoda melanoleuca ENSAMEG00000004942 I 0.683
NOBOX Canis familiaris ENSCAFG00000003500 I 0.683
DLX4 Myotis lucifugus ENSMLUG00000007268 I 0.682
DLX3 Bos taurus ENSBTAG00000017409 I 0.682
TELCIR_10796 Teladorsagia circumcincta TELCIR_10796 I 0.681
nRc.2.0.1.g35501 Romanomermis culicivorax nRc.2.0.1.g35501 I 0.681
NEMVEDRAFT_v1g198584 Nematostella vectensis NEMVEDRAFT_v1g198584 I 0.681
L798_10521 Zootermopsis nevadensis L798_10521 N 0.681
HCOI01026600 Haemonchus contortus HCOI01026600 I 0.681
L892_g9682 Steinernema scapterisci L892_g9682 I 0.680
tetur14g02510 Tetranychus urticae tetur14g02510 I 0.679
EFV53972 Trichinella spiralis EFV53972 N 0.678
ENSPSIG00000014030 Pelodiscus sinensis ENSPSIG00000014030 I 0.678
BGLB009341 Biomphalaria glabrata BGLB009341 I 0.676
DLX4 Bos taurus ENSBTAG00000007353 I 0.675
ENSBTAP00000009672-D1 Bos grunniens ENSBTAP00000009672-D1 I 0.675
ENSOARG00000005572 Ovis aries ENSOARG00000005572 I 0.674
LHX6 Gorilla gorilla ENSGGOG00000008310 I 0.671
L798_11440 Zootermopsis nevadensis L798_11440 I 0.670
ANCCAN_10593 Ancylostoma caninum ANCCAN_10593 I 0.668
Cmyd_10006547 Chelonia mydas Cmyd_10006547 N 0.668
ENSCSAVG00000000940 Ciona savignyi ENSCSAVG00000000940 I 0.667
EVEC_0000357701 Enterobius vermicularis EVEC_0000357701 I 0.664
HPLM_0001894101 Haemonchus placei HPLM_0001894101 I 0.661
OESDEN_01216 Oesophagostomum dentatum OESDEN_01216 I 0.660
SVUK_0001056001 Strongylus vulgaris SVUK_0001056001 I 0.659
PEQ_0001388201 Parascaris equorum PEQ_0001388201 I 0.659
GM12914 Drosophila sechellia FBgn0167846 I 0.658
Gfo_R002825 Geospiza fortis Gfo_R002825 I 0.656
HPLM_0000384301 Haemonchus placei HPLM_0000384301 N 0.653
L798_02534 Zootermopsis nevadensis L798_02534 N 0.653
ENSSTOG00000019392 Ictidomys tridecemlineatus ENSSTOG00000019392 N 0.652
BGIBMGA003233 Bombyx mori BGIBMGA003233 I 0.651
ECANG7_01330 Echinococcus canadensis ECANG7_01330 I 0.651
MIXL1 Callithrix jacchus ENSCJAG00000012740 I 0.650
CGI_10009720 Crassostrea gigas CGI_10009720 I 0.650
ENSTSYG00000014450 Tarsius syrichta ENSTSYG00000014450 I 0.648
HMEL016421 Heliconius melpomene HMEL016421 I 0.648
ALUE_0000848601 Ascaris lumbricoides ALUE_0000848601 I 0.647
PEQ_0001069001 Parascaris equorum PEQ_0001069001 I 0.645
TCNE_0001081001 Toxocara canis TCNE_0001081001 I 0.645
BGLB009977 Biomphalaria glabrata BGLB009977 I 0.644
BGLB014161 Biomphalaria glabrata BGLB014161 I 0.642
ADAC004891 Anopheles darlingi ADAC004891 N 0.641
ENSBTAP00000049813-D5 Bos grunniens ENSBTAP00000049813-D5 I 0.640
Alligator_sinensis_CCG014496.1 Alligator sinensis Alligator_sinensis_CCG014496.1 I 0.636
ANCCAN_22461 Ancylostoma caninum ANCCAN_22461 N 0.635
TTAC_0000701101 Hydatigera taeniaeformis TTAC_0000701101 N 0.634
tetur02g13510 Tetranychus urticae tetur02g13510 I 0.630
HDID_0000333701 Hymenolepis diminuta HDID_0000333701 N 0.630
T265_02852 Opisthorchis viverrini T265_02852 I 0.629
ASTEI06918 Anopheles stephensi ASTEI06918 N 0.627
TCNE_0000653501 Toxocara canis TCNE_0000653501 I 0.627
SPU_006159 Strongylocentrotus purpuratus SPU_006159 N 0.626
fgenesh2_pg.scaffold_174000078 Branchiostoma floridae fgenesh2_pg.scaffold_174000078 N 0.624
MCOS_0000655901 Mesocestoides corti MCOS_0000655901 N 0.624
ANCCEY_04248 Ancylostoma ceylanicum ANCCEY_04248 N 0.618
lhx8b Takifugu rubripes ENSTRUG00000017607 I 0.618
ENSLACG00000001487 Latimeria chalumnae ENSLACG00000001487 I 0.609
ENSFCAG00000029037 Felis catus ENSFCAG00000029037 I 0.606